Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2754 ATGGCAACAACACTAGAGTGTTGGTCAAGCCGCACCACCACTACCACCACAACAACCACCACCGATGAAGACACAGTTGAACAACAACAAGTTCTCATGAGAACACATCACAGATCCGAACTTTCTTCTTCTTCTTCTTCCATTACTTCTCTTTCTCTTCCTTCCAAAGACTCGTCAATTCTAATTCACAAGAACAACAAGTTTCACAAACTCAGTCGTAATTTCACTGATGCAATTACATCTTTCAAAAACACACTCAATTTCAATAATAACAATAACAATACTGAGTCTTTTGCTTCTTCTAAGAAACTTGCTTGGGCTTCTGTTCTTCGTAATCTTACTCAACTTTACCCTGGAACTCAATTACCTGATAATCTTATATCTACCATTCGTAATCATTACCATTCTCTTCCTCTCAGTTATGCACAGGCAGAATTTGATATGAAGGATGTGTTTCTTCACATCAAGTTGATGGATCAGGCAATGGAAAGTGATCAGCCTGCGATTTTGATTCAACAACAGTGTGGTGACGGCGAGATTCAGGTTCAAGGGTCTGTATTGAAGCTCACTTTTGCTTGCAATTCTCTTATTTCATGGCCTGCTATGTCGGTTGCGTTGGACAGTTTCTCCATTTGTAGCAAGAGGCCACAAATCTTTGAGAAGAAATGTTTCACCTTAGGGGTTGTTCTTCTCGTTGTTAGGTCCGGGCATGAAAAATTGGTCAAGACTCGGGTTGAGAATGCTTTGAAGTTTGCTTTAAATAAGCCCAAAAACAATGCTGTGAATGTGAAGCTTGCATTTGGACTTTGTGGGTGTCAGGAAGAGAATTTCAAGGGGAGAGAACTAGGGGAGATTGGAGAAGATAGTGGTAGCGGAAAGGAGTTTGAGAATTCTAGCCAAAAGATTCAGCTTCAAATGCCTTTGCCTACCTCATCTTTCATTGTGTCGGTAGATGAATGGCAGACGATAAAGTCAGGTGGGGATGAGATTGCGAAATGGTTGTTAAATGCAGATATGGTTGAGTTCACAGAACAGATTGGACCCAATTCTTATAAAGGAGTCTACATGGGGAAAAGGGTTGGAATTGAGAAGCTGAAAGGGTGTGAAAAAGGAAATTCTTACGAGTTTGAGCTCCACAGAGATCTTCTAGAACTGATGACTTGTGGACATAGAAACATTCTGCAGTTCTGTGGTATTTGTGTGGATGATAATCATGGGTTATGTGTGGTGACTAAGTTCATGGTACGTGGGTCGGTCCATGACTTAATGCTAAAGAACAAGAAGCTTCAGACTAAGGATGTTGTTAGAATCGCGGTTGATGTAGCTGAGGGGATCAAGTTTATGAATGACCATGGTGTTGCATATAGAGACCTTAATACACAGAGGATTCTATTAGATAGGCATGGGAATGCTTGCTTGGGAGATATGGGTGTAGTCACTGCCTGCAAGAGTGTTAGTGAAGCAACGGAGTATGAAACCGATGGTTATAGGTGGCTAGCTCCTGAGATAATTGCAGGAGACCCTGAGAGCGTGACAGAGACATCTTCGAGCAACATTTATAGTTATGGGATGATAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTACACTTTCTCCTGTGCAGGCTGCAGTTGGTATTGCTGCTTGTGGTCTTAGACCTGAAATTCCCAAGGACTGTCAACCTAATCTAAGATACATTATGACAAAATGCTGGAACAACACTCCTTCCAAACGTCCTAAGTTCTCCGATATTTTAGCCATATTGCTGCAACCATACAACAACAATAGGTAA 1797 0.4146 MATTLECWSSRTTTTTTTTTTDEDTVEQQQVLMRTHHRSELSSSSSSITSLSLPSKDSSILIHKNNKFHKLSRNFTDAITSFKNTLNFNNNNNNTESFASSKKLAWASVLRNLTQLYPGTQLPDNLISTIRNHYHSLPLSYAQAEFDMKDVFLHIKLMDQAMESDQPAILIQQQCGDGEIQVQGSVLKLTFACNSLISWPAMSVALDSFSICSKRPQIFEKKCFTLGVVLLVVRSGHEKLVKTRVENALKFALNKPKNNAVNVKLAFGLCGCQEENFKGRELGEIGEDSGSGKEFENSSQKIQLQMPLPTSSFIVSVDEWQTIKSGGDEIAKWLLNADMVEFTEQIGPNSYKGVYMGKRVGIEKLKGCEKGNSYEFELHRDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMVRGSVHDLMLKNKKLQTKDVVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGVVTACKSVSEATEYETDGYRWLAPEIIAGDPESVTETSSSNIYSYGMIIWEMVTGEAAYSTLSPVQAAVGIAACGLRPEIPKDCQPNLRYIMTKCWNNTPSKRPKFSDILAILLQPYNNNR* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2754 598 Gene3D Transferase(Phosphotransferase) domain 1 334 595 - -
Tpr4g2754 598 PRINTS Tyrosine kinase catalytic domain signature 411 424 IPR001245 GO:0004672|GO:0006468
Tpr4g2754 598 PRINTS Tyrosine kinase catalytic domain signature 447 465 IPR001245 GO:0004672|GO:0006468
Tpr4g2754 598 PRINTS Tyrosine kinase catalytic domain signature 517 539 IPR001245 GO:0004672|GO:0006468
Tpr4g2754 598 PRINTS Tyrosine kinase catalytic domain signature 561 583 IPR001245 GO:0004672|GO:0006468
Tpr4g2754 598 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 594 - -
Tpr4g2754 598 ProSiteProfiles Protein kinase domain profile. 340 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2754 598 Pfam Protein tyrosine and serine/threonine kinase 375 589 IPR001245 GO:0004672|GO:0006468
Tpr4g2754 598 PANTHER SERINE-THREONINE PROTEIN KINASE 1 594 - -
Tpr4g2754 598 SUPERFAMILY Protein kinase-like (PK-like) 326 590 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2754 Tpr-Chr4 30815705 30819438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2754 326 592 MAP Kinase Kinase Kinase AT2G17700 34.307 4.42e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Tpr4g2754 PK_Tyr_Ser-Thr 4.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2754 - - pvu:PHAVU_008G258400g 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2754 4 30815705 30819438 Tpr4g2754 4 30815705 30819438 ECH
Tpr3g3700 3 41214120 41217780 Tpr4g2754 4 30815705 30819438 PCT