Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2737 ATGCCGCCGTCATCAGAATCATGTTATTCTCCCTCTCAGGTTGTTGAAGTTTCAACTTCCAAAACTGGAAAACATCATGTTAAGTGTTGCTTTGTTGGTATTGACATCTTCACTGGACAAAAACTTGAAAATATTGTTCCTTCTACTCATAACTGTGATGTTCCTCGTGTCAAGCCGTCACCGACGCCTTTCCAGGAGGTGCTTGAGTGTATGTTTGATTACATTAATAGGTTGTTTAACATGGTGCGACCTAGGAAGCTGTTGTTTATGGCTATTGATGGTGTTGCATCGAGGGCTAAAATGAACTAG 309 0.411 MPPSSESCYSPSQVVEVSTSKTGKHHVKCCFVGIDIFTGQKLENIVPSTHNCDVPRVKPSPTPFQEVLECMFDYINRLFNMVRPRKLLFMAIDGVASRAKMN* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2737 102 Pfam XRN 5'-3' exonuclease N-terminus 49 102 IPR004859 GO:0003676|GO:0004527
Tpr4g2737 102 Gene3D - 8 56 IPR014722 -
Tpr4g2737 102 PANTHER BNAA07G09420D PROTEIN 11 57 - -
Tpr4g2737 102 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 11 57 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Tpr4g2737 102 SUPERFAMILY Translation proteins SH3-like domain 10 59 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2737 Tpr-Chr4 30559615 30561020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2737 11 72 Eukaryotic Initiation Factors Gene Family AT1G26630 61.905 5.34e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2737 - K12619 sly:101258556 86.2705