Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2731 ATGTCTATATATATAAACCTTTTCACGCACAAAACCAAAACCAACACAAACCAAAAAAAAAAACAAACACAAAGAAACAGAGCAATGACTAAGATTCATTCTAATTCTTGGGTGAGAGGTAAGTGTATTGGTAAAGGAGCGTTTGGCGTTGTGAATTTAGCTTATTCAAAAAGCGATTCTAGTGTTTTCGCGGTGAAATCTGTTGATTTAAAAACAGGTCATCCAAATCAGTTACAAGCGTTGGAGAATGAAATTCAGATATTGAAACGGTTATCTTCTTATTCTTCTTCTTGTTCTTCGCACGTGGTAGGTTTTTACGGAGAAGATGTCACGTGTGAAGGAACTACGACGTCGTTTAAGAATCTACACTTGGAGTATATGCCAGGTGGCACCGTTGCTGACATGGATCGTGCTGACGTGGATGAACGGTTAGTTAGAAACTTCGCGTGGTGTCTTGTTAACGCGCTGCTTGAAATTCACGCGTCTGGTGTTGTTCACTGTGATGTGAAAGGAAGGAATGTTCTTGTCGCCGGTGATGGTTCCATCGTTAAACTTGCTGATTTTGGTTCGGCGGTGGAATTTGAATCTTCCGGTGGTGAGTGTGAAGTTCCGCGTGGAAGTCCGATGTGGATGGCACCGGAGGTAATTCGCCGGGAATATCAAGGACCGGAATCCGATGTGTGGTCGCTTGGATGTACTTTGATTGAGATTCTCACCGGAAAACTGCCGTGGGAGGATCGCGGTATCGATACGTTGAGTCGAATTGGATTTTCCGATGAGTTACCGGAGTTTCCGAGTAATTTATCGGAGCTTGCAAGAGATTTTCTCGAGAAGTGTCTCCAAAGAGATCGGAGCCAGAGATGGAGATGTGATCAGCTACTTCAGCATCCATTTCTATTACCGTGTGATCGCGTTGTGGAATCGTCACCTCGTTGCGTTTTGGATTGGGTTGACTCGCAATTCACTGAGTCAGAAAACGAGTTTGAGTTCGAATTAGAATTTGAAAAAGAAAAAGAAGTGAAGTTGAATAATAATAATGATGAAAATTTAGTTAAAAATAGAATTAGTAAATTAGCAACGGAGTTAAGTGTAAATTGGGAAAGTGATGATTGGGTTGTGGTGAGGGCATTTTCGTCAGAAGAAAAAGAACCAAATTGTGAAGGTGAAGAAGTAGGGGTAACATGGGAATTTGAGAATGTTGTAGAAGAGGAAATGGAGGTAGAGGCTAGTTTGGTAAATTTGGATTGTGATGAAAGGGTAAAACGGGAAATGTGGGAGTTTGGTAAGAGGAATAGGTTGTTGTGGTTGTGGCGGTGTGAGTGGAAGTACAACCGTAACCGCAGGAACAGCATTACAGGTGGAAGTTGTTGTGGTAGGAGATGTCGGTATAGATACGGTTGGGGAAAGTTTAATAGGAATATTATTTATATTAGTGGAATATTCAGTATTTACATATTCTGTTGTAAAATAATTAAATCATGTTATTTGTTCTCAATATATTATCCTTTTTGGATAAAAATATTAGTATTGCATTGCTGTTTGAAATTGAAATTCTGGTTAAAAATTATTAAGGGTCTGTTTATTTTGAATTTTAGTAGAAATAATTTTGAGATGATTGATTATACAAAAAGTAAATTTAAAGAGAATATTCATATTTTAAAAAATAAACAACTGTCATGA 1680 0.3857 MSIYINLFTHKTKTNTNQKKKQTQRNRAMTKIHSNSWVRGKCIGKGAFGVVNLAYSKSDSSVFAVKSVDLKTGHPNQLQALENEIQILKRLSSYSSSCSSHVVGFYGEDVTCEGTTTSFKNLHLEYMPGGTVADMDRADVDERLVRNFAWCLVNALLEIHASGVVHCDVKGRNVLVAGDGSIVKLADFGSAVEFESSGGECEVPRGSPMWMAPEVIRREYQGPESDVWSLGCTLIEILTGKLPWEDRGIDTLSRIGFSDELPEFPSNLSELARDFLEKCLQRDRSQRWRCDQLLQHPFLLPCDRVVESSPRCVLDWVDSQFTESENEFEFELEFEKEKEVKLNNNNDENLVKNRISKLATELSVNWESDDWVVVRAFSSEEKEPNCEGEEVGVTWEFENVVEEEMEVEASLVNLDCDERVKREMWEFGKRNRLLWLWRCEWKYNRNRRNSITGGSCCGRRCRYRYGWGKFNRNIIYISGIFSIYIFCCKIIKSCYLFSIYYPFWIKILVLHCCLKLKFWLKIIKGLFILNFSRNNFEMIDYTKSKFKENIHILKNKQLS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2731 559 Gene3D Transferase(Phosphotransferase) domain 1 27 369 - -
Tpr4g2731 559 Pfam Protein kinase domain 39 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2731 559 SMART serkin_6 37 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2731 559 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 33 404 - -
Tpr4g2731 559 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 33 404 - -
Tpr4g2731 559 SUPERFAMILY Protein kinase-like (PK-like) 31 313 IPR011009 -
Tpr4g2731 559 CDD STKc_MAPKKK 36 299 - -
Tpr4g2731 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Tpr4g2731 559 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Tpr4g2731 559 ProSiteProfiles Protein kinase domain profile. 37 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2731 Tpr-Chr4 30459001 30460719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2731 37 387 MAP Kinase Kinase Kinase AT2G30040 57.022 4.98e-122 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr4g2731 Pkinase 2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2731 - - mtr:MTR_5g071560 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2731 4 30459001 30460719 Tpr4g2731 4 30459001 30460719 ECH