Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2718 ATGGCTGATGCTTTAATTGGAGTTGCGTTTGAGAATTTGATATCTCTGCTTCAAAATGAATTTTCAACCATTTCTAGAATCAGTTCAAAGGCTCAAAAGCTATCAAACAACTTAGATCTGATCAAGGCTGTTCTTGAAGATGCTGAGAAGAAACAACTCACAGACCACTCTATTAAGGTATGGCTACAACAACTCAAAGATGCTGTATATGTGCTCGATGATGTCCTTGACGAGTGTTCCATTCAATCCAATCGACTTAAGGGCTTATCTTGTTTCAAACCAAAGAATATCATTTTCCGCCATAACATTGGAAACAGGTTGAAAGAAATTACAAGCAGATTCGATGAAATTGCTGACAGGAAGAACAAGTTTCTTCTACAACAGGGTGTTACTGCCAAGGAAATGACAGTCGAAGTGGCTGAATGGCGTCAAACCAGCTCAATTATTGCTGAACCCAAAGTATACGGACGAGAAGATGATAAAGAGAAGATTGTCGAGTTTCTTCTCAACCAAGCGAGGAGGGACTCTAACTCTCTTTCCGTCTATCCCATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTCGCTCAATTGGTCTACAATGATCAAAGGGTGAGTACCACCAATTTTGATACAAAGATATGGGTTTGTGTTTCTGAATCTTTCTCGATCAAGAGAATTCTATGTTCCATTATAGAATCTATCAAATGTGAGAAGTGTGATGTCTTGGATTTAAATGTAATACAAAGAAAGGTGCAGGAACTTTTGCAAGGTAAAAGATTTTTACTTGTTTTAGATGATGTTTGGAACAAAAATGCAGAACTGAAATTCGGATTGAGCCAGGAGAAATGGAACCAGTTGAAATCAGTGTTGTCCAGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACTCGTGATGAGGTTGTCGCATCAATCACGGGAACATGTCAAGCTCATTATTTATCTGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGAATTGACAGAGAAGAACTAGTAGAGCTTGTGGAAATAGGCAAGGAGATAGCGAAAAAGTGCAGGGGGTTGCCTCTCGCTGCACAAGCATTGGGAGGTCTAATGCGCTCAAGGTATGCAGAAAAAGAATGGCTTGAAATTAAAGAAAGCGGACTTTGGGATCCACCGAGTGACAATTATGTTTTGCCAGCCTTGACATTAAGCTATTCTTATTTAACGCCGACCTTAAAGCAATGTTTTGCTTTTTGTGCTATATTTCCCAAAGATACAATAATGTTGAAGGAAGAACTGATTCATCTTTGGATGGCTCATGGATTTATTTCATCTAGGAAAAATTTGGAGGTTGAAGATATTGGCCACATGATGTGGAATGAATTGTGCCAAAAATCATTCTTTCAAGACATTATGATGGATGGATATGCTGGAGACATGTCATTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAATGGGGCAAGAATGTTTGTATTTGGAGGATGCCAACATGACTAGCTTGTCAAAAAGCACACACCACATAAGTGTTCACTCTGATGACTTGTTATCAATCGATAAGGGAGCCTTCAAAAAAGTTGAATCCTTGCGAACATTTTTTCAGTTGAACCCATATCCTAAAAAAAACCATCATTACTTCCCAACAAACTGTTTTCTTCGGGTTTTGCGCACATCCTTTATCCATGCACCGTCACTAGGGAGTTTAATTCATTTAAGGTATTTGGAACTTCGTTCCCTTGACATTGAAACGTTGCCCGACTCAATTTACAACTTACAAAAAATAGAAATCTTGAAAATAATAGGTTGTCATAAACTGAGTTGTCTTCCAAAACGCTTGGTTTGCTTACAAAATCTTAGACATTTAGTCGTTGATTTTTGTGATTCCCTGTCTAGCTTGTTTCCAAACATTGGAAAAATATCTTGCTTAAGAACATTAAGTTTATACATTGTTAGTTTAGAGAAAGGTAATAGCTTGGCAGAGTTACGTGATCTAAACCTAGGTGGAGAACTGAGTATTGAAGGCTTAAATAATGTTGGCAGTTTAGCTGAAGCTCAAGAGGCCAATTTGATGTGTAAAAAAGACCTTCGAGTATTACAGTTGTCATGGAAAATAAGAAGTGATGAATCTACAAAGACCTCTGCTATTAATGCTGAACAACTACTTGAAGTGCTTCAACCTCACTCAAATCTCAAGAGGTTACAAATAGATTACTATGAAGGATTATTGTTACCAAGTTGGATAAGCTTTCTTAGTAATTTAGTTTCTCTTAAACTTTGGGATTGCATGAACTGTGTGCGGCTTCCGTTAATTGGTAACTTACAATCTTTAAAAAAACTGGAATTAAACAATATGGTTAGTCTTAAATACTTGGATGATGAGTCTCACGATGGTATAGGGTTCCAATCTCTGCAGGAACTCTATTTATCGAACTTACCAAACATAGAGGGGTTATTGAAAGTGGAAAGAGGGGAGGCATTTCCTTGTCTTTCTCATATGTTAATCAACTCTTGCCCTAAACTTGGACTACCATGTCTTCCATCTCTTAAACACCTTTGTGCCGATGAATGTAACAATGAGGAGTTGCTGAGGTCAATTTCTACCTTCTGCAGTCTTACCACTCTTAGCCTTTTAGGAGGCGATGAAGGAATAACATCCTTCCCAGAGGGGATGTTCACAAACCTTACTTTTCTTCAAACTCTAGAAATATTTGGATTCTCAAAATTGAAGGAGTTACCAAATGAACCCTTTAACCTAGCTTTGGAGCATATGAGTATCTCTTGCTGCCATGAGCTTGAGTCTTTTCCAGAGCTAATTTGGGAAAGTCTACAATCCCTTCGATCTCTACAGATTTCTTATTGTAAAGAATTACGATGCTTGCCAGAGGGTATTCGAAACCTAACTTCTCTTGAGGTTCTGGATATTATTGGATGTGCAACATTAGAGGAAAGATGCAAGGAGGGAATAGGGGAGGACTGGTACAAGATTGCACATATTCCAAAAGTGAAGATTGTGCGGCGATGA 3057 0.3814 MADALIGVAFENLISLLQNEFSTISRISSKAQKLSNNLDLIKAVLEDAEKKQLTDHSIKVWLQQLKDAVYVLDDVLDECSIQSNRLKGLSCFKPKNIIFRHNIGNRLKEITSRFDEIADRKNKFLLQQGVTAKEMTVEVAEWRQTSSIIAEPKVYGREDDKEKIVEFLLNQARRDSNSLSVYPIVGLGGVGKTTLAQLVYNDQRVSTTNFDTKIWVCVSESFSIKRILCSIIESIKCEKCDVLDLNVIQRKVQELLQGKRFLLVLDDVWNKNAELKFGLSQEKWNQLKSVLSSGSKGSSCLVSTRDEVVASITGTCQAHYLSGLSENECWLLFKQYAFGIDREELVELVEIGKEIAKKCRGLPLAAQALGGLMRSRYAEKEWLEIKESGLWDPPSDNYVLPALTLSYSYLTPTLKQCFAFCAIFPKDTIMLKEELIHLWMAHGFISSRKNLEVEDIGHMMWNELCQKSFFQDIMMDGYAGDMSFKMHDLVHDLAQSIMGQECLYLEDANMTSLSKSTHHISVHSDDLLSIDKGAFKKVESLRTFFQLNPYPKKNHHYFPTNCFLRVLRTSFIHAPSLGSLIHLRYLELRSLDIETLPDSIYNLQKIEILKIIGCHKLSCLPKRLVCLQNLRHLVVDFCDSLSSLFPNIGKISCLRTLSLYIVSLEKGNSLAELRDLNLGGELSIEGLNNVGSLAEAQEANLMCKKDLRVLQLSWKIRSDESTKTSAINAEQLLEVLQPHSNLKRLQIDYYEGLLLPSWISFLSNLVSLKLWDCMNCVRLPLIGNLQSLKKLELNNMVSLKYLDDESHDGIGFQSLQELYLSNLPNIEGLLKVERGEAFPCLSHMLINSCPKLGLPCLPSLKHLCADECNNEELLRSISTFCSLTTLSLLGGDEGITSFPEGMFTNLTFLQTLEIFGFSKLKELPNEPFNLALEHMSISCCHELESFPELIWESLQSLRSLQISYCKELRCLPEGIRNLTSLEVLDIIGCATLEERCKEGIGEDWYKIAHIPKVKIVRR* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2718 1018 Gene3D - 406 497 IPR036388 -
Tpr4g2718 1018 CDD RX-CC_like 2 119 IPR038005 -
Tpr4g2718 1018 SUPERFAMILY L domain-like 485 853 - -
Tpr4g2718 1018 Pfam NB-ARC domain 157 387 IPR002182 GO:0043531
Tpr4g2718 1018 PRINTS Disease resistance protein signature 181 196 - -
Tpr4g2718 1018 PRINTS Disease resistance protein signature 255 269 - -
Tpr4g2718 1018 PRINTS Disease resistance protein signature 359 373 - -
Tpr4g2718 1018 PRINTS Disease resistance protein signature 976 992 - -
Tpr4g2718 1018 Pfam Rx N-terminal domain 6 101 IPR041118 -
Tpr4g2718 1018 PANTHER DISEASE RESISTANCE PROTEIN RP 29 969 IPR044974 GO:0006952
Tpr4g2718 1018 PANTHER OS05G0414200 PROTEIN 29 969 - -
Tpr4g2718 1018 Gene3D - 323 405 IPR042197 -
Tpr4g2718 1018 SUPERFAMILY RNI-like 812 999 - -
Tpr4g2718 1018 Coils Coil 31 51 - -
Tpr4g2718 1018 Gene3D - 137 318 IPR027417 -
Tpr4g2718 1018 Gene3D Ribonuclease Inhibitor 856 1000 IPR032675 -
Tpr4g2718 1018 Gene3D Ribonuclease Inhibitor 666 855 IPR032675 -
Tpr4g2718 1018 Gene3D Ribonuclease Inhibitor 500 665 IPR032675 -
Tpr4g2718 1018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 421 IPR027417 -
Tpr4g2718 1018 Gene3D - 6 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2718 Tpr-Chr4 30163305 30167361 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2718 165 820 WRKY Transcription Factor Family AT5G45050 22.772 4.74e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2718 - - mtr:MTR_5g071220 1391.71