Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2701 ATGGGCAATGGTTCAGCAGAAGCTATGCAATGGGCAATGGCTGAGCTCCTTAACCATCCTGAAGCATTTCACAAGGTAAGAAATGAGATAGAGTCAGTCACACAGAATGTTAGGTTAGTTGAAGAATCAGATATCCCAAACCTGCCATATTTACAAGCAGTGGTAAAAGAAACACTGAGACTTTATCCACCAGGACCAGTAACAACAAGAGAATGCAATCAAGACTGCAAAATTAATGGCTTTGATATACCAGCAAAAACAGCAGTAGCGATCAATTTATATGCTATAATGAGGGATCCAGAAATTTGGGAAGATCCAAATGAATTTCATCCTGAAAGGTTCTTGAAAGAAAAAGATGATCAAAGTAGTTATTATGATTATCAGAATGATGATAAAAGAATGGAGTTCAATTTTGTTCCATTTGGAGCAGGAAGAAGAGGGTGTCCAGGGACAGCACTAGCATTTTAA 468 0.3803 MGNGSAEAMQWAMAELLNHPEAFHKVRNEIESVTQNVRLVEESDIPNLPYLQAVVKETLRLYPPGPVTTRECNQDCKINGFDIPAKTAVAINLYAIMRDPEIWEDPNEFHPERFLKEKDDQSSYYDYQNDDKRMEFNFVPFGAGRRGCPGTALAF* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2701 155 PRINTS P450 superfamily signature 18 31 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PRINTS P450 superfamily signature 53 64 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PRINTS P450 superfamily signature 139 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PRINTS P450 superfamily signature 148 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 141 150 IPR017972 GO:0005506|GO:0016705
Tpr4g2701 155 Pfam Cytochrome P450 5 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 4 155 - -
Tpr4g2701 155 SUPERFAMILY Cytochrome P450 6 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PRINTS E-class P450 group I signature 9 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PRINTS E-class P450 group I signature 52 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PRINTS E-class P450 group I signature 92 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PRINTS E-class P450 group I signature 148 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 Gene3D Cytochrome P450 4 155 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2701 155 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2701 Tpr-Chr4 30007617 30009223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2701 5 155 Cytochrome P450 AT2G42250 53.642 2.58e-57 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2701 - K23814 qsu:112004860 239.58