Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2689 ATGTTCTCACCTGCTAGAACCATAGCTCTACACTCATCACCATCACCATCATCATCAACATCTCCTTCAATTTCCAAATCAAACACAACAACCAATTTTATTCCCAAACCCAAAAGTCTCCTCCAAAACCACCCACTTTACACACCAACTAATGAAAAACTCTCCCTTCAATTCAAAGAAAAAATCCTATCTCTTGAATTAATGGATATTGATTCAGGTAAAGCACTCTCTCAAAATCCTAATCTTCACACAGCTACCTTAGAATCCATTCATTCCATTATCACTTTCCTTCTCTCCAAAGGATTAATACATCAAGACCTTCCAAGAATCTTTGGTATGTGTCCTAAGATTCTCACTTCAAATATCGAAACTGATCTTAACCCAGTTTTTGATTTTCTCATACAAGACCTTAAAGTACCTGATTATAAGTTTAGAAAAGTTATCAAAAAGTGTCCAAGATTACTTACTTCTAGTGTTAAGGATCAGCTTAAACCAGCTTTGTTTTATCTTAATAGATTAGGTTTAAGGGATTTAGATGCTTTAGCTTATCATGATTGTGTTTTATTGGTTTCAAATGTTGAAAGGACACTTATTCCTAAACTTAGGCATTTGGAGAGTATGGGATTTTCTAAAGAAGAGGTTAGATGTATGGTGGTTAGGTGTCCTGCATTGTTGACTTTTAGTATTGAGAATAGTTTTAAGCCAAAATTTGAGTATTTTTCTGTGGAAATGAAGGGGAAATTGGAAGAGTTGAAACATTTTCCTCAGTATTTCTCTTTTAGTTTGGAGAATAGGATTAAGGTTAGACATATGGAGATTGTTCAAAATGGGGTAAATTTGCCTTTGTCATTGATGCTGATAAGTACTGATGATGAATTTAGAGAGTTGATAGCCAAGGGGAATAAGTGA 909 0.3432 MFSPARTIALHSSPSPSSSTSPSISKSNTTTNFIPKPKSLLQNHPLYTPTNEKLSLQFKEKILSLELMDIDSGKALSQNPNLHTATLESIHSIITFLLSKGLIHQDLPRIFGMCPKILTSNIETDLNPVFDFLIQDLKVPDYKFRKVIKKCPRLLTSSVKDQLKPALFYLNRLGLRDLDALAYHDCVLLVSNVERTLIPKLRHLESMGFSKEEVRCMVVRCPALLTFSIENSFKPKFEYFSVEMKGKLEELKHFPQYFSFSLENRIKVRHMEIVQNGVNLPLSLMLISTDDEFRELIAKGNK* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2689 302 PANTHER CGI-12 PROTEIN-RELATED 15 299 IPR003690 GO:0003690|GO:0006355
Tpr4g2689 302 Pfam mTERF 75 176 IPR003690 GO:0003690|GO:0006355
Tpr4g2689 302 Pfam mTERF 189 293 IPR003690 GO:0003690|GO:0006355
Tpr4g2689 302 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 299 - -
Tpr4g2689 302 MobiDBLite consensus disorder prediction 1 29 - -
Tpr4g2689 302 Gene3D Transcription termination factor 3, mitochondrial 158 301 IPR038538 -
Tpr4g2689 302 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Tpr4g2689 302 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Tpr4g2689 302 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Tpr4g2689 302 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Tpr4g2689 302 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Tpr4g2689 302 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2689 Tpr-Chr4 29836205 29837351 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr4g2689 mTERF 8.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2689 K15032 - gmx:100788221 412.535