Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2685 ATGAGCTTTTTTTCAGATTCTACATCAAGACCATTTCGTACCATGAATGAAGATATGGAAAATAATGTAGAGACACAAGAAAACAATTCATCATCAAGTTCTTCAATGGTGAGAAAGAAATCAGATATAGTTATGGTGACAAATAATAATGTTCGGTTTCAAATGGTTAGAAATGTGATGATAAATATGAAAGAGGTGATGTTGGGTACTAAGCTTGTTGTGCTTTTTCCGGCTGTTCCTTTAGCTGTTGCTGCTGATTTTTATAGCCTTGGAAGACCTTGGATTTTTGCTTTGAGCTTGCTTGGACTTGCTCCCCTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTTCACCGGCCCAACAGTTGGAGGGCTTCTAAATGCAACTTGTGGGAATGCAACTGAAATGATAATAGCAATATTAGCACTTCATCAGAACAAAATACATGTTGTGAAGTTCTCCCTGCTTGGTTCCATTCTTTCAAACCTTCTATTGGTTCTAGGCAGCTCACTCCTTTGTGGTGGCTTAGCAAACCTTAAGAGAGAGCAAAGATATGACAGAAAACAAGCAGATGTGAATTCATTGCTTTTGTTGCTGGGATTGCTATGCCATTTGCTACCTTTAATGTTCAAATATGCCTTGGCTGGGGGAAATCATTCTATTGCCAGTTGTACTCTTCAATTGTCAAGAGCAAGCAGTGTTGTTATGCTTCTAGCATATGTTGCATATATCTTCTTCCAATTGAAAACTCATCGAAAAATATTTGATGCACATGAGGTGGAAGATGAAGATGATGAAAAAGCAGTGATAGGATTTTGGAGTGCATTTAGTTGGTTGGTGGGTATGACATTGGTCATATCTGTGCTTTCTGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGAATCTTGGGGAATTTCTGTTAGCTTCATTAGCATAATTTTGCTTCCAATTGTTGGGAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAATTGGACATATCTTTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTATAAGAATGGATTTGGACTTCAACCTTCTTGAAACTGGATGTCTTGGTTTTGCAATTATTGTTACAGCCTTCACTTTACAGGATGGAACTTCACACTATATGAAAGGAGTGATTCTTACTCTCTGTTACATTGTCATTTCTGCATGTTTTTTCGTTCTCAAATCTCCACAAATCAACCAATATGGTATCGCCGTGCTTTGA 1311 0.3814 MSFFSDSTSRPFRTMNEDMENNVETQENNSSSSSSMVRKKSDIVMVTNNNVRFQMVRNVMINMKEVMLGTKLVVLFPAVPLAVAADFYSLGRPWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAILALHQNKIHVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLMFKYALAGGNHSIASCTLQLSRASSVVMLLAYVAYIFFQLKTHRKIFDAHEVEDEDDEKAVIGFWSAFSWLVGMTLVISVLSEYVVGTIEAASESWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLETGCLGFAIIVTAFTLQDGTSHYMKGVILTLCYIVISACFFVLKSPQINQYGIAVL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2685 436 TIGRFAM cax: calcium/proton exchanger 77 421 IPR004798 GO:0006816|GO:0015369
Tpr4g2685 436 TIGRFAM caca2: calcium/proton exchanger 58 421 - -
Tpr4g2685 436 MobiDBLite consensus disorder prediction 1 38 - -
Tpr4g2685 436 Pfam Sodium/calcium exchanger protein 94 251 IPR004837 GO:0016021|GO:0055085
Tpr4g2685 436 Pfam Sodium/calcium exchanger protein 278 418 IPR004837 GO:0016021|GO:0055085
Tpr4g2685 436 Gene3D - 269 421 IPR044880 -
Tpr4g2685 436 Gene3D - 123 266 IPR044880 -
Tpr4g2685 436 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Tpr4g2685 436 PANTHER VACUOLAR CATION/PROTON EXCHANGER 16 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2685 Tpr-Chr4 29763470 29769637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2685 33 427 Antiporters AT2G38170 66.998 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2685 K07300 - gmx:100816844 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2685 4 29763470 29769637 Tpr4g2685 4 29763470 29769637 ECH