Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2672 ATGGATCTGTCACCTTACCTGAATGAGTATATGTTTGTAGGATTCTTAGCTTCAACCGGTAACCACACACAAATTCACAACATACTCTCTTGGAACTTCACTTCAAATAGCCAAGCTTTTCTTCGCTACCCTTCATCTGAAACATGTCAAGGTAAGATCATGCTTGAGAATACTACAGAAACAATAGCAGCTACCGATAAGAACTCTAATAGGAACAAAACTCCGCGAAGCTTTTTGATTTTTGTGGCTGCTGTAGTGTGGGCTTTGGTTGTTTTAGTTGGTTTTTACTTTATCAGCAAACACAGAAGAAGTGTTTATAAATCAAGGACTTCTACAGAGGAAGATATTCATAGGCCAAGGCCTCCTAACAAACCACGTCGCTTCGCTTTTTCTGCAATTTCCTCTTTGACTAGATCATTCAGTGAGATAGAAGTACTTGGAAGTGATACTAGAGGAGTATACTACAGAGGAAAGCTTAGTAATGGAAGCCAAGTAGCTGTGAAAAGATTCTCAACTGAATTTCTCAGTACACACGGATCCGATAAGAAGCGCTTGTTGAAAGAAATCAAAGTCATTAATCATGTTCGTCACCCGAATTTGCTTCCAATAAGGGGATGGTGTCAAGACAACAATGAAATCATTGCAGTCAATGATTTTGTCCCCAATGGAAGCCTCGATAAATGGCTATTCGGAGCTGGTGTTCCTCCGTGGACGCGTCGGTTCAAAGTCATCAAAGATGTAGCCGACGGCTTGAGTTTCTTGCACAGTAAACAACTAGCTCACAAGAACATGAAATGCAGCAGTGTGTTTCTAGATGTCAGCTTCAGAGCTGTTTTGGGAGATTTTGGATTTGTGCTATTGGGAGCAGAATCAAAACAGTTTGAGGCAGTAGTGTGTAATGGTGCTGATGTGTTTGAGTTTGGTGTGATTGTGTTGGAAGTGATTGGTGGAAGGCCAAGGGTGGAGGAAACAGATGAAGGAAATTCGGAAGAGAGGAACCTATTAGATTTTGCATGGAACTTGCATGAGACTGATGAGTGA 1041 0.4131 MDLSPYLNEYMFVGFLASTGNHTQIHNILSWNFTSNSQAFLRYPSSETCQGKIMLENTTETIAATDKNSNRNKTPRSFLIFVAAVVWALVVLVGFYFISKHRRSVYKSRTSTEEDIHRPRPPNKPRRFAFSAISSLTRSFSEIEVLGSDTRGVYYRGKLSNGSQVAVKRFSTEFLSTHGSDKKRLLKEIKVINHVRHPNLLPIRGWCQDNNEIIAVNDFVPNGSLDKWLFGAGVPPWTRRFKVIKDVADGLSFLHSKQLAHKNMKCSSVFLDVSFRAVLGDFGFVLLGAESKQFEAVVCNGADVFEFGVIVLEVIGGRPRVEETDEGNSEERNLLDFAWNLHETDE* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2672 346 Pfam Protein kinase domain 141 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2672 346 Gene3D - 1 80 - -
Tpr4g2672 346 Pfam Legume lectin domain 1 39 IPR001220 GO:0030246
Tpr4g2672 346 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 37 IPR013320 -
Tpr4g2672 346 PANTHER - 9 339 - -
Tpr4g2672 346 ProSiteProfiles Protein kinase domain profile. 140 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2672 346 Gene3D Transferase(Phosphotransferase) domain 1 221 345 - -
Tpr4g2672 346 Gene3D Phosphorylase Kinase; domain 1 110 219 - -
Tpr4g2672 346 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 9 339 - -
Tpr4g2672 346 SUPERFAMILY Protein kinase-like (PK-like) 116 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2672 Tpr-Chr4 29623809 29625275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2672 1 343 Receptor kinase-like Gene Family AT3G53380 31.172 2.75e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr4g2672 Pkinase 1.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2672 - - lja:Lj2g3v2196580.1 563.533