Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2656 ATGGCTGAAGCTTTGCTTGGTGTTGTTTTTGAGAATTTGCTGTCTCTTGTTCAAAATGAATTTTCCACCATTTCTGGTATCAAGTCAAAGGCTCAAAAGTTATCAACCACCTTAGATCTCATCAACGCCGTTCTTGAAGATGCTGAGCACAAACAGCTCACCAACCGTTCCATTAAGGTTTGGCTTCAACAACTCAAAGATGCAATTTATGTGCTGGAGGATATTCTTGATGAATGTTCCATCGAATCTGGTCGACTTAAGGGTGCATCCTCTTCCAAACTGAAGAACATCATGTTGCGCCGTAAGATCGGAAACAAGTTCAAGGAGATTACAAGCAGATTCAATCAAATTGCTGAAAGTAAGAACAAGTTTCTTCTACAAGTGGTTGGTACAGTTAGGGAAAGGCAACAAGAAGTGGCTGTATGGCGCCAAACCACCTCTATTATTGCCGAACCCAAAGTGTATGGTCGAGAGGATGATAAAGAGAAGATTGTCGAATTTCTTCTCACCCAGGCAAGAGGCTCTGACTTCCTCCCTGTGTATAGCATCGTCGGCTTAGGTGGTGTTGGAAAAACAACTCTTGCTCAATTGGTCTTCAATGATCAGCGGGTAAGTATTCATTTTGATACAAAAATTTGGGTGTGTGTTTCAGAGATTTTCTCTATCAAGACGATTTTGTGTTCTATTATAGAATCTATCACAAGAAATAAGTGTTACGACTCCAATTTAGACGTAATGCAAACAAAAGTGCAAGAAAGATTGCAAGGTAAAAGATATTTGTTGGTCTTGGATGATGTATGGAAAAGAAATCAGGAATTGGAATATGGATTAAGCCAGGACAATTGGAATAAGTTGAAAGCTGTGTTATCGTGTGGATCCAAAGGTGCTGCGGTTTTAGTTTCCACTCGTGACAGGGATGTTGCAGGAATCATGGGAACTTGTGAAACTCATTGTCTATCTGGTCTCTCTGAAGACGAATGTTTGTTATTGTTCAAACAATATGCATTCGGACATAGGAAAGAAGAGCGGGCAGAGCTTGTGGCTATTGGCAAGGAAATCATCAAGAAGTGTGGTGGATTACCTCTTGCAGCACAATCGTTAGGTGGTCTAATGCGCTCAAGAAGTCAAGAAAAGGAATGGCTTGAAATTAAAGATAGTGAGATTTGGACTTTACCTGATGAGAATTCAATTTTGCCAGCTTTGAGATTGAGCTACATATATTTAACACCAACCTTGAAGCAGTGTTTCGCGTTTTGTGCTATATTTCCTAAAGATACAGAAATGATGAAGGAAGATTTGATTCATCTTTGGATGGCTAATGGATTCATTTCATCTAGGAAAAATTTGGAAGTAGAAGATGTTGGCAATATGGTCTGGAATGAATTGTGCCAGAAATCATTCTTCCAAGACATCAAGGTGGCTGTTGATTCAGAAGACATTTCTTTTAAGATGCATGATCTTCTCCATGATCTAGCTCAATTTGTTACCGGGCCTGAGTGTATGATTTTGGAGAGCTCAAACTCTGATTTATCAAGAAGCACTCATCATATTAGTTTTGACTATCCCACTTTGCTATCAATCAATGAAGGTACCTTCAAAAAAATTGAATCCTTGCGAACACTATATGGTATAAAATTTTATAACTGCCACTCTTTTTCTCAAAGTCGCTTCCCAACAAACAGCTCTCTGCGGGTTTTACGGATAGATTGTTCAATGTTATTTTCACTTGAGAGCTTTACTCATTTGAGGTATTTGGAACTTTATGGTTTCTCAACCTTTGAAGACATATCTGACTCAATTCATACATTGAAGAATTTGGAAGTCTTAAAATTTAAAAGTTTTTGGAAAACTAGTTATCTACCTGAACACTTAAGTTGCTTACAGAATCTCAGACACCTTGTCATCGAAGATTGTAATTCACTGTCTTCTCTCTTTCCTAATATTGGAAAGTTATCTTGCCTAAGAACATTAAGTGTATTTATTGTTCGTCGGGAGACGGGACACAAGTTGACAGAGTTACATGATCTAAAGTTGGGGGGAAAACTGAGCATCGAAGGCCTAAAAAATGTTGGTAGTTTATCTGAAGCTCAAGAGGCCAATATGATGAGTAAAAAGGACATCCAAGAATTATGCTTGTCATGGAGCAAAAGTGTAGTATTTACCGAGGGACCAACTACTAGTGCAGAGCAAGTAATTGAAGCACTTCAACCCCACTCAAACCTTAAGAGGTTGAAAATAGATCTCTATGATGGGTTATCCTTACCAAGTTGGATCAGGATTCTGAGTAGTTTAATTTCTGTTGAACTTTCTGGTTGTGACAACTGCGTGCAGCTTTCAGCACTTAGCAAACTGCCGTGTCTAAAAAAAATATATTTACGCCAGATGGATAATGTGCAGTACATGGATGATGATGAACCTCCCCATGGTGTGGAAGTGAGGGCTTTCCCATCTCTAGAAGAACTCTCATTAGATGGGTTACCAAACTTAGAGCGATTGTTGAAAGTGGAAAGTGTAGAGATGTTCCCCCATCTTTCTAATTTTACCATCATAAATTGCCCTAAACTTGTGTTGCCACGCCTCTCATCTGTTAAATACCTATTTGTAGATGGATGTAACAACGAGTTACTGAGACAAATCTCTAGTTTCTATGGTCTTACAACTCTTCACCTTCATAAAAATGAAGATGTGACATCCCTCCCAGACGGTATGTTAAGAAACCTGACCTCCCTTCAAACTCTGACAATATCTGATTTCCTAAAATTGATGGAATTGCCAAATGAACCCTTCAATCTTTCTTTGGAACATCTGTGTATCAATCGTTGTGGTGAGCTTGAGTCTTTGCCGGAGCAACTTTGGGAAGGTTCACTTTCTCTTCGAACGATCGATATTGTTCAATGTGAAGGATTGAGATCCTTGCCGGAAGGTATTCGACAACTCACTTCACTTCAGGTTTTGACTATTCATGGTTGCCCAACATTAAAGAAGCGCTGCGAGGAGCAAACAGGGGAGGACTGGGATAAGATAGCGCACATTCCAAAATTACTGATTTGGTAG 3054 0.3926 MAEALLGVVFENLLSLVQNEFSTISGIKSKAQKLSTTLDLINAVLEDAEHKQLTNRSIKVWLQQLKDAIYVLEDILDECSIESGRLKGASSSKLKNIMLRRKIGNKFKEITSRFNQIAESKNKFLLQVVGTVRERQQEVAVWRQTTSIIAEPKVYGREDDKEKIVEFLLTQARGSDFLPVYSIVGLGGVGKTTLAQLVFNDQRVSIHFDTKIWVCVSEIFSIKTILCSIIESITRNKCYDSNLDVMQTKVQERLQGKRYLLVLDDVWKRNQELEYGLSQDNWNKLKAVLSCGSKGAAVLVSTRDRDVAGIMGTCETHCLSGLSEDECLLLFKQYAFGHRKEERAELVAIGKEIIKKCGGLPLAAQSLGGLMRSRSQEKEWLEIKDSEIWTLPDENSILPALRLSYIYLTPTLKQCFAFCAIFPKDTEMMKEDLIHLWMANGFISSRKNLEVEDVGNMVWNELCQKSFFQDIKVAVDSEDISFKMHDLLHDLAQFVTGPECMILESSNSDLSRSTHHISFDYPTLLSINEGTFKKIESLRTLYGIKFYNCHSFSQSRFPTNSSLRVLRIDCSMLFSLESFTHLRYLELYGFSTFEDISDSIHTLKNLEVLKFKSFWKTSYLPEHLSCLQNLRHLVIEDCNSLSSLFPNIGKLSCLRTLSVFIVRRETGHKLTELHDLKLGGKLSIEGLKNVGSLSEAQEANMMSKKDIQELCLSWSKSVVFTEGPTTSAEQVIEALQPHSNLKRLKIDLYDGLSLPSWIRILSSLISVELSGCDNCVQLSALSKLPCLKKIYLRQMDNVQYMDDDEPPHGVEVRAFPSLEELSLDGLPNLERLLKVESVEMFPHLSNFTIINCPKLVLPRLSSVKYLFVDGCNNELLRQISSFYGLTTLHLHKNEDVTSLPDGMLRNLTSLQTLTISDFLKLMELPNEPFNLSLEHLCINRCGELESLPEQLWEGSLSLRTIDIVQCEGLRSLPEGIRQLTSLQVLTIHGCPTLKKRCEEQTGEDWDKIAHIPKLLIW* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2656 1017 Gene3D - 6 118 - -
Tpr4g2656 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 419 IPR027417 -
Tpr4g2656 1017 CDD RX-CC_like 2 119 IPR038005 -
Tpr4g2656 1017 PRINTS Disease resistance protein signature 180 195 - -
Tpr4g2656 1017 PRINTS Disease resistance protein signature 253 267 - -
Tpr4g2656 1017 PRINTS Disease resistance protein signature 357 371 - -
Tpr4g2656 1017 PRINTS Disease resistance protein signature 977 993 - -
Tpr4g2656 1017 PANTHER OS05G0414200 PROTEIN 28 991 - -
Tpr4g2656 1017 SUPERFAMILY L domain-like 483 854 - -
Tpr4g2656 1017 Gene3D Ribonuclease Inhibitor 664 858 IPR032675 -
Tpr4g2656 1017 Gene3D Ribonuclease Inhibitor 859 1002 IPR032675 -
Tpr4g2656 1017 Gene3D - 135 316 IPR027417 -
Tpr4g2656 1017 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Tpr4g2656 1017 Gene3D - 321 403 IPR042197 -
Tpr4g2656 1017 SUPERFAMILY L domain-like 812 993 - -
Tpr4g2656 1017 Gene3D - 404 494 IPR036388 -
Tpr4g2656 1017 Gene3D Ribonuclease Inhibitor 498 661 IPR032675 -
Tpr4g2656 1017 Coils Coil 31 51 - -
Tpr4g2656 1017 PANTHER DISEASE RESISTANCE PROTEIN RP 28 991 IPR044974 GO:0006952
Tpr4g2656 1017 Pfam Rx N-terminal domain 6 92 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2656 Tpr-Chr4 29467871 29471612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2656 183 659 WRKY Transcription Factor Family AT5G45050 22.180 3.04e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2656 - - mtr:MTR_5g071220 1303.12