Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2655 ATGGCTGATGCTTTACTTGGAGTGGCGTTTGAGAATTTGATGTCTCTGCTTCAAAATGAATTTTCAACCATTTATGGAATCAGGTCAAAGGCTCAAAAACTATCAAACACCTTGGATCTGATCAAGGCTGTTCTTGAAGATGCTGAGAAGAAACAACTCACAGACCGCTCTATTAAGGTATGGCTACAACAACTCAAAGATTCTGTATATGTCCTCGATGATATTCTTGATGAGTGTTCCATTGAATCCAATCGACTTAAGGGCTCATCCTCTTTCAAACCAAAGAATATCATTTTCCGCCATAACATTGGAAACAGGTTGAAAGAAATTACAAGCAGATTCAATGATATTGCTGACAGGAAGAACAAGTTTTTTCTACAAGAGGGTGTTACTGCTAAGGACATTACAATTGAAGTGGCTGAATGGCGTCAAACCAGCTCAATTATTGCCGAACCCAAAGTGTACGGACGAGAAGATGATAAAATGAAGATTGTCGAGTTTCTCCTCAACCAAGCGAGGGACTCTAACTCCCTTTCCATCTATCCCATTGTTGGCTTAGGAGGCATTGGAAAAACAACTCTCGCTCAATTGGTCTTCAATGATCAAAGGGTGAGTACCAATTTTCATACAAGGATATGGGTTTGTGTTTCTGAAGCTTTCTCGGTCAAGACGATTCTATGTTCCATTATAGAATCTATCAAAAGTGAGAAGTGTGATGCCTTGGATTTAGATGTAATACAAAGAAAGGCGCAAGAACTATTACAAGGTAAAAGATTTTTGCTAGTTTTAGATGACGTTTGGAACAAAAATGAAGAACTGAAATTCGGATTGAGCCAAGAGAAATGGAACCAGTTGAAATCAGTGTTGTCCATTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACTCGTGATGAGGTTGTTGCATCAATCATGGGAACATGTCAAGCTCATCATTTGCGTGTTCTCTCTGAAAACGAATGTTGGTTGTTATTCAAACAATATGCATTTGGACATGACAGAGAAGAACAAGTAGAGCTCGTGGAAATAGGCAAGGATATAGCAAAAAAGTGTCGGGGATTGCCTCTTGCTGCACAAGCATTGGGAGGTCTAATGCGCTCAAGGAGTGGAGAAAAAGAATGGCTTGAAATTAAAGAAAGTAGACTTTGGGATTCACAGAGTGACAATAATATTTTGCCAGCCTTGAGGTTGAGCTACTCTTATTTATCGCCGCCCTTAAAGCAGTGTTTCACATTTTGTGCTATGTTTCCCAAAGATACTGAACTCTTGAAGGAAGAATTGATTCATCTTTGGATGGCTCATGGATTTATTTCATCTAGGAAAAATTTGGAGGTTGAAGATGTTGGCAGCATGATTTGGAATGAATTGTGCCAAAAATCATTCTTTCAAGACATTAAGATGGATGAAGATTCTGGTGACATTTCATTTAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAACAGGGCAAGAATGTTTGTATTTGGAGGATGCAAACATGACTAGTTTGTCAAAGAGCACACACCACATAAGTGTTCACTCCAAAGACTTGTTATCAATCGATGAGGCTGCCTTCAAAAAAGTTGAATCCTTGCGAACTTTTTTTCAACTGGACCAATTTGGTGGAGAAAATCATCATTACTTCCCAACAAACCGTTTTCTTCGGGTTTTACGCACATCTTTTATCCACATACCATCACTAGGGAGTTTAATTCATTTAAGGAATCACTTCCTTATTACACAGTTGTTTCTTGGAACATATTTTGAGTGA 1794 0.3857 MADALLGVAFENLMSLLQNEFSTIYGIRSKAQKLSNTLDLIKAVLEDAEKKQLTDRSIKVWLQQLKDSVYVLDDILDECSIESNRLKGSSSFKPKNIIFRHNIGNRLKEITSRFNDIADRKNKFFLQEGVTAKDITIEVAEWRQTSSIIAEPKVYGREDDKMKIVEFLLNQARDSNSLSIYPIVGLGGIGKTTLAQLVFNDQRVSTNFHTRIWVCVSEAFSVKTILCSIIESIKSEKCDALDLDVIQRKAQELLQGKRFLLVLDDVWNKNEELKFGLSQEKWNQLKSVLSIGSKGSSCLVSTRDEVVASIMGTCQAHHLRVLSENECWLLFKQYAFGHDREEQVELVEIGKDIAKKCRGLPLAAQALGGLMRSRSGEKEWLEIKESRLWDSQSDNNILPALRLSYSYLSPPLKQCFTFCAMFPKDTELLKEELIHLWMAHGFISSRKNLEVEDVGSMIWNELCQKSFFQDIKMDEDSGDISFKMHDLVHDLAQSITGQECLYLEDANMTSLSKSTHHISVHSKDLLSIDEAAFKKVESLRTFFQLDQFGGENHHYFPTNRFLRVLRTSFIHIPSLGSLIHLRNHFLITQLFLGTYFE* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2655 597 PRINTS Disease resistance protein signature 180 195 - -
Tpr4g2655 597 PRINTS Disease resistance protein signature 253 267 - -
Tpr4g2655 597 PRINTS Disease resistance protein signature 357 371 - -
Tpr4g2655 597 Coils Coil 31 51 - -
Tpr4g2655 597 CDD RX-CC_like 2 119 IPR038005 -
Tpr4g2655 597 Gene3D - 138 317 IPR027417 -
Tpr4g2655 597 Gene3D - 411 494 IPR036388 -
Tpr4g2655 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 419 IPR027417 -
Tpr4g2655 597 Gene3D - 6 121 - -
Tpr4g2655 597 Pfam NB-ARC domain 158 405 IPR002182 GO:0043531
Tpr4g2655 597 PANTHER DISEASE RESISTANCE PROTEIN RP 27 583 IPR044974 GO:0006952
Tpr4g2655 597 Gene3D - 321 409 IPR042197 -
Tpr4g2655 597 PANTHER OS05G0414200 PROTEIN 27 583 - -
Tpr4g2655 597 Pfam Rx N-terminal domain 6 100 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2655 Tpr-Chr4 29463763 29467787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2655 183 499 WRKY Transcription Factor Family AT5G45050 25.776 5.52e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2655 - - mtr:MTR_5g071220 870.152