Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2654 ATGGTTGAGGCTTTACTTGAAGTTGTGCTTGAGAACCTAGTATCTCTGCTTCGTAATGAATTTTCCACCATTTCTAGAATCAAATCTAAAGCTCAAAATCTGTCAAATACCTTAGAACTCATCAACGCCGTTCTTGAAGACGCTGAGCAAAAACAAGTCAAAGACAGCTCTATTAAGGTATGGCTACAACAGCTCAAAGACGCAGTTTATGTGCTCGATGATATGCTTGACGAATGTTCCATTCAATCCAATCGACTTAAGGGTGCATCCTCTTTAAAACCAAAGAACATTATGTTTCGCTACAACATTGGCAACAAGTTTAAAGAGATTACAAAGAGATTTGATCAAATTGCTGAAAGTAAGAACAAGTTCGTTCTACGAGTGGGTGTTAATGTTAGAGAATGGCCAATTGAAGTGGCTGAATGGCGCCAAACTAGTTCGACTATTGCTGGACCAAAAGTGTACGGACGAGAAGATGATAAAGAGAAGATTGTTGAGTTTCTTCTCACCCAAGTAAGGGACTCTGACTTCCTTTCTGTCTATCCAATTGTCGGCTTAGGTGGTGTTGGAAAAACAACACTTGCTCAATTTGTCTACAATGATCATAGGGTGAGTAGCAATTTTCATACAAAAGTTTGGGTTTGTGTTTCTGAGATTTTCTCTGTCAAGAGGATTTTGTGTTCCATTATAGAATCTATAACTAGAGAAAAATGTGATGCCTTGGATTTAGATGTGTTTGAAAGAAAAGTGCAAGAACTCTTGCAAGGTAAAAGATATTTGTTAGTTTTGGATGATGTATGGAATAGAAATCAAGGATTAGAATTTGGATTAAGCCCAGAGAAATGGAATAAGTTGAAATCTGTATTGTCGTGTGGATCCAAAGGTTCTTCCATTTTGGTTTCCACTCGTGATAAGGATGTAGCGGCAATCATGGGAACATGCCAATTTCATCATTTATCTGGTCTCTCTGATAATGAATGTTGGTTGTTGTTTAAACAATATGCATTTGGACACGACAAAGGAGAGCAGGAAGAGCTAGAGGCAATAGGCAAGGAGATAGTAAAGAAGTGTGGGGGATTGCCTCTTGCGGCACAAGCATTGGGAGGTATAATGCGATCAAGGAGTGGAGAAAAGGAATGGCTTGAAGTTAAGGAGAACCGGCTTTGGTCTTTACCAGATCAGAATTATATTTTGCCCGCCTTGAGTTTGAGCTACTTATATTTAACACCGACCTTAAAGCAGTGTTTTGCTTTTTGTGCCATGTATCCTAAAGATACCGAAATTGTGAAGGCAGATTTGATTTATCTCTGGATGTCCAATGGGTTCATTTCATCAAGGAAAAATTTGGATGTAGAAGATGTTGGAAATATGATTTGGAATGAATTGTGCCAAAAGTCATTCTTCCAAGACATCAAGATGAATGATTATTCGGCAGACATCTGTTTCAAAATGCACGATCTTGTCCATGATCTTGCTCAATCAGTTATGGGATCAGAATGTCTGTTTTTAGAAAATGGAGACGTGACTGGTTTGTCAAAGAGCACTCACCATATTAGTTTTAAACCGGCTGGAATGTTATCATTTGATGGGGATGCGTTCAAAAAAGTTGAATCCTTGCGAACATGGTATCAGTTAAATTTTTACAACCCTAAACTTTTTACTTACTTCCCAACCAGTCGTTCTCTTCGGGTTTTATGCACAAGCAGTTTCAAGTTATCATCATGCGGAAGTTTAATACATTTGAGGTATTTGGAGCTTTATGATTTTGATGGTATAGAAACCATTCCTGACTCAATCTATAACTTGCAGAAATTGGAAATTTTGAAATTGAAATGTTTTTTAAAGCTGAGTTGTCTACCGAAACACTTAACTCGCTTAAAATATCTCAGACATCTTATCATTCAAAACTGTTTGTCATTGTCTCGTGTGTCTCCTTTCATTGGAAAATTATCTTGCCTAAGAACATTAAGTGTATACATTGTTGGTTTAGAGACAGGACACAACTTAAGAGAGTTACATGATCTAAAGCTTGGAGGAAAACTAAGCATAGAAGGCCTTAAAAATGTCATTAGTTTATCTGATGCTCAAGATGCAAATTTGATGGGCAAAACAGACCTCCAGGTATTATGCTTGTCATGGGGAAATAGTGGTGAAACCAAGACACCTATTATTAGTCCTAAACAAGTACTCGAAGTGCTTCAACCTCACTCAAATGTCAAGAGCTTGACAATATGTTTCTATGATGGATTATTCTTCCCAACTTGGATTGGAATACTGAGTAGTTTAGTTTCTGTAGTATTTCGTTGTTGCACGAACTGCATACGACTTCCACCCATAGGTAATCTACCATTTCTGAAAAACCTTGAATTATTTAATATGGATAATCTGCAGTATATGGATGATGATGACTCTCTCAATGGTGAGGTGAGGGCTTTTCCATCCCTGGAGAAACTCTCATTACATAGGTTACCGAACTTAGAGCGATTGTTGAAAGTGGATAGAAAGGAGATGTTCCCCCGTCTTTCTAATTTGACCATCAACTGTTGCCCTAAACTTGCATTGCCATGCCTTCCATCTGCTAAATACCTCTTTGTGTTTGGATGTAACAACGAGATGTTGTCGTCAATCTCTAGTTTTTGTGGTCTTACAACTCTTCAACTTGATGCAAATGAAGACATGAAATCCTTCCGAGAGGGGATATTGAGAAACATGACTTGTCTTCATACTCTAAAAATAATTGGTTTCACAGAATTGAAGGAATTTCCAAATGATTTTTTCAACCCAGCTTTGGAGCATCTACAAATATCTTATTGTGGTAAGCTTGAGTCTCTACCAGAGAAAATTTGGGAAGGCCTTAGATCGCTCCGAACTTTGAAGATTGATCTATGTGTAAGATTGAGATCCTTGCCAGAAAGTATTCGACATCTCACTTCACTGGAGGTTCTGCATATTCGTGGTTGCCCGATATTAAAGGAGCGATGCAAGGAGGAAATAGGGAAGGACTGGGACAAGATAGCACACATTCCTAATTTAAATATTGATTAG 3045 0.3796 MVEALLEVVLENLVSLLRNEFSTISRIKSKAQNLSNTLELINAVLEDAEQKQVKDSSIKVWLQQLKDAVYVLDDMLDECSIQSNRLKGASSLKPKNIMFRYNIGNKFKEITKRFDQIAESKNKFVLRVGVNVREWPIEVAEWRQTSSTIAGPKVYGREDDKEKIVEFLLTQVRDSDFLSVYPIVGLGGVGKTTLAQFVYNDHRVSSNFHTKVWVCVSEIFSVKRILCSIIESITREKCDALDLDVFERKVQELLQGKRYLLVLDDVWNRNQGLEFGLSPEKWNKLKSVLSCGSKGSSILVSTRDKDVAAIMGTCQFHHLSGLSDNECWLLFKQYAFGHDKGEQEELEAIGKEIVKKCGGLPLAAQALGGIMRSRSGEKEWLEVKENRLWSLPDQNYILPALSLSYLYLTPTLKQCFAFCAMYPKDTEIVKADLIYLWMSNGFISSRKNLDVEDVGNMIWNELCQKSFFQDIKMNDYSADICFKMHDLVHDLAQSVMGSECLFLENGDVTGLSKSTHHISFKPAGMLSFDGDAFKKVESLRTWYQLNFYNPKLFTYFPTSRSLRVLCTSSFKLSSCGSLIHLRYLELYDFDGIETIPDSIYNLQKLEILKLKCFLKLSCLPKHLTRLKYLRHLIIQNCLSLSRVSPFIGKLSCLRTLSVYIVGLETGHNLRELHDLKLGGKLSIEGLKNVISLSDAQDANLMGKTDLQVLCLSWGNSGETKTPIISPKQVLEVLQPHSNVKSLTICFYDGLFFPTWIGILSSLVSVVFRCCTNCIRLPPIGNLPFLKNLELFNMDNLQYMDDDDSLNGEVRAFPSLEKLSLHRLPNLERLLKVDRKEMFPRLSNLTINCCPKLALPCLPSAKYLFVFGCNNEMLSSISSFCGLTTLQLDANEDMKSFREGILRNMTCLHTLKIIGFTELKEFPNDFFNPALEHLQISYCGKLESLPEKIWEGLRSLRTLKIDLCVRLRSLPESIRHLTSLEVLHIRGCPILKERCKEEIGKDWDKIAHIPNLNID* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2654 1014 PRINTS Disease resistance protein signature 180 195 - -
Tpr4g2654 1014 PRINTS Disease resistance protein signature 253 267 - -
Tpr4g2654 1014 PRINTS Disease resistance protein signature 357 371 - -
Tpr4g2654 1014 PRINTS Disease resistance protein signature 974 990 - -
Tpr4g2654 1014 PANTHER OS05G0414200 PROTEIN 27 943 - -
Tpr4g2654 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 419 IPR027417 -
Tpr4g2654 1014 Gene3D - 6 118 - -
Tpr4g2654 1014 SUPERFAMILY L domain-like 470 1006 - -
Tpr4g2654 1014 Pfam NB-ARC domain 157 386 IPR002182 GO:0043531
Tpr4g2654 1014 Gene3D - 321 403 IPR042197 -
Tpr4g2654 1014 Gene3D Ribonuclease Inhibitor 853 1001 IPR032675 -
Tpr4g2654 1014 Gene3D Ribonuclease Inhibitor 530 852 IPR032675 -
Tpr4g2654 1014 Coils Coil 31 51 - -
Tpr4g2654 1014 PANTHER DISEASE RESISTANCE PROTEIN RP 27 943 IPR044974 GO:0006952
Tpr4g2654 1014 Gene3D - 404 495 IPR036388 -
Tpr4g2654 1014 Gene3D - 141 316 IPR027417 -
Tpr4g2654 1014 CDD RX-CC_like 3 119 IPR038005 -
Tpr4g2654 1014 Pfam Rx N-terminal domain 6 100 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2654 Tpr-Chr4 29446729 29450329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2654 183 385 WRKY Transcription Factor Family AT5G45050 27.885 5.69e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2654 - - mtr:MTR_5g071220 1324.3