Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2649 ATGAATGGTGTGGATGATTTACAGGGAAATTGTTGCTACAGTGTATTAGTTCTTAGTGTGGAGAAATTTGATTACTTCAACTGTGACACAAGTGCACCAATCACTACTTTCACCAATGGAAAGAGCACTTTTAATCTTGACAGATCAGGACCTTTCTATTTCATAAGTGGAACTGATGATCATTGCAACCATGGCCAAAAATTGCTCGTTGAAGTTATGGCGCCGCATTCAATTCCAGCATCTCCACCTACCACCATTGCAGTTCCGCCTGAAGGTTCATCACCGATCATGGCTCCTTCGGATTCACCTTATTCTTCTGATTCCGTGGATCAGGCTACTTCATCTTCCACCATGGTGCTTGCTTCAAGTTTTCTGTCTACTTTGATCACATTTGGAATTGTGATGATGTTAGCACTCTAA 420 0.4167 MNGVDDLQGNCCYSVLVLSVEKFDYFNCDTSAPITTFTNGKSTFNLDRSGPFYFISGTDDHCNHGQKLLVEVMAPHSIPASPPTTIAVPPEGSSPIMAPSDSPYSSDSVDQATSSSTMVLASSFLSTLITFGIVMMLAL* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2649 139 MobiDBLite consensus disorder prediction 89 108 - -
Tpr4g2649 139 ProSiteProfiles Phytocyanin domain profile. 1 74 IPR003245 GO:0009055
Tpr4g2649 139 PANTHER EARLY NODULIN-LIKE PROTEIN 2 17 90 - -
Tpr4g2649 139 Gene3D - 12 73 IPR008972 -
Tpr4g2649 139 SUPERFAMILY Cupredoxins 17 73 IPR008972 -
Tpr4g2649 139 PANTHER BLUE COPPER PROTEIN 17 90 IPR039391 GO:0009055
Tpr4g2649 139 Pfam Plastocyanin-like domain 17 66 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2649 Tpr-Chr4 29386435 29387998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2649 17 77 Phytocyanin Superfamily AT1G79800 55.738 3.65e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2649 - - gmx:100783893 134.806