Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2637 ATGGGATGGACCAATAAAAAGCAAAAAGTTCACTATGAAAAAGACAAGGTCCCACTTATTTACTATTTTATATGTACTTTTTATTACCTTTTATATATGTGTGACATGTCGCATTACCAACATAACATAGTATTTCAATTTCAACACCCCCCATTGCATTATTCTTCTCATCTCACACCTACACCAACCCTCCCATATCTAATCTACAATCTATCCATCTCAACAGAACAAGACAGATACCACACCAGAAGAAAAAAAGGGAGCAAGCAAAGTGATTTAAAGATGGGTTCTTTATGTGATTTTTGCGGAGACCAGAGGTCCGTGGTGTACTGCCGCTCTGATGCTGCTTCCTTATGTTTGTCATGTGATCGAAATGTTCATTCTGCTAACACACTTTCTAAGCGTCATTCAAGAACACTTGTATGTGAGAGATGTAATTTACAACCTGCATATGTGAGGTGTGTTGAAGAGAAAGTTTCACTTTGTCAGAACTGTGATTGGTCGGCTCATGGTACCGATCCATCTTCTTCAACGCACAAGAGACAATCAATTAATTGCTACTCTGGCTGTCCTTCAGCTTCCGAGCTTTCTTCAATATGGCCCTTTTTCTCAGACATCCCTTCTATGGGTGAAGCATGTCAGCAGGAACTCGGTTTGATGAGCATTAATGATAACAGCGAAAATAAATCTATTCTTCCTCCAGAAAGCAAGAATGTGTCTGGTTCTACTCAATTTGCCGATCTTCCCAGCAAGGATAAGTCAAGGGTCAGCACATCTTCAATACCCGAGTCAAGTGCAAAATCTTATATTATTGACCAGGCGCCTGGACCTTCCGATGAATGTATGCCTAAGGAACAGTTACAATGTTCCAGTAGAAAGTCTCCTGCACTTTGTGAAGATGATAATTTTTATGATGATTTCAACATAGATGATATGGATCTTGAACTCGAGAACTATAAGGAAATTTTTGCTTTTGCTCTCAATCACTCAGAAGAGTTTTATGAAAAGGGCAGTATTGATAGCTTATTTGAAAGAAAAGACATGTCTGCTAGTGATGTTGCTGCTGAGGGGCCATCAGCTCGGTTTATCAGTTCTATCCAACCAGCATGCAGCAATGCAGCATCTGCAGATTCAATATTAAGTACTAAAACTGAACCGGTTCTTTATTTCACGGAAAGGCAATCTCAATCAAACATTTCATTTTCCAGTGCTACAAAAGATGCTAGTGCTGGTGGCAGTCTAGAGTGTGGTGCTTCCTCAATGCTTCTCATTGGGGAGCCTCCCTGGTCTCCTCCTTGCCCTGTGACTTCTATTCAATCTGCTAATCGAAGCAATGCTGTCATGCGTTATAAGGAAAAGAAAAAGAATCGGAAGTTTGATAAGAAAGTAAGATATGCTTCTCGGAAGGCTAGGGCTGATGTCAGAAAACGTGTGAAAGGCCGGTTCGTCAAAGCTGGGGAAACATTCGACTATGACCCTTTGAGCGAAACCAGAAGCTGCTGA 1503 0.4079 MGWTNKKQKVHYEKDKVPLIYYFICTFYYLLYMCDMSHYQHNIVFQFQHPPLHYSSHLTPTPTLPYLIYNLSISTEQDRYHTRRKKGSKQSDLKMGSLCDFCGDQRSVVYCRSDAASLCLSCDRNVHSANTLSKRHSRTLVCERCNLQPAYVRCVEEKVSLCQNCDWSAHGTDPSSSTHKRQSINCYSGCPSASELSSIWPFFSDIPSMGEACQQELGLMSINDNSENKSILPPESKNVSGSTQFADLPSKDKSRVSTSSIPESSAKSYIIDQAPGPSDECMPKEQLQCSSRKSPALCEDDNFYDDFNIDDMDLELENYKEIFAFALNHSEEFYEKGSIDSLFERKDMSASDVAAEGPSARFISSIQPACSNAASADSILSTKTEPVLYFTERQSQSNISFSSATKDASAGGSLECGASSMLLIGEPPWSPPCPVTSIQSANRSNAVMRYKEKKKNRKFDKKVRYASRKARADVRKRVKGRFVKAGETFDYDPLSETRSC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2637 500 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 95 499 - -
Tpr4g2637 500 Pfam CCT motif 443 485 IPR010402 GO:0005515
Tpr4g2637 500 ProSiteProfiles CCT domain profile. 443 485 IPR010402 GO:0005515
Tpr4g2637 500 ProSiteProfiles Zinc finger B-box type profile. 94 141 IPR000315 GO:0008270
Tpr4g2637 500 CDD Bbox1_BBX-like 141 184 - -
Tpr4g2637 500 MobiDBLite consensus disorder prediction 232 266 - -
Tpr4g2637 500 SMART bboxneu5 142 184 IPR000315 GO:0008270
Tpr4g2637 500 SMART bboxneu5 94 141 IPR000315 GO:0008270
Tpr4g2637 500 ProSiteProfiles Zinc finger B-box type profile. 137 184 IPR000315 GO:0008270
Tpr4g2637 500 CDD Bbox1_BBX-like 98 141 - -
Tpr4g2637 500 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 95 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2637 Tpr-Chr4 29156366 29160417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2637 95 499 C2C2-CO-like Transcription Factor Family AT3G07650 53.828 1.74e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Tpr4g2637 CCT 6.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2637 - - gmx:100783016 590.112