Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2622 ATGAGTAACACTACGACAAAGAGTATTAAGGAATGGTTCAAGTCATCTGAAGCTCTTATGAGCATGTTATTAGTGCAATTATTTGCCACTGGAATGCAACTATTGTCAAGGGTCATCTTAGTGCAAGGGACCTATGTATTTTCACTACTCGTCTATAGACACATAGTTGCTGCATTTTGCGTTGCTCCATTTGCATTATACTTTGAAAGAGGACGGGAGAAGAAATTCAATTGGAAAGTTTGGTTTTTGCTTTTCCTCAATGGATTAGTGGGGATGACAATGGCTCTAGGATTCTTCTATTATGGTCTTCGTGACACATCGGCTACATATTCTGTAAACTTTCTAAACATGGTTCCTATTTTCACATTCATGACCTCTATCATATGCAGAATGGAGTATCTAAGGTTTGGAACATGGGGTGGCAAAGCTAAGTGTATTGGAGCACTTCTCTGTGTTGGTGGAGCCTTAGTAACCGGTTTGTATAAAGGAAAAGAATTTTATATCTCTCATCATCATGCTCACCATTCTGCTCAGACAAATGTTGTTGCAGCACATAAAATCAACATGTTTCGTGGCACTTTCTTTTTGATTGCATCATGCTTCTCTTACACAGCTTGGTTTATTCTGCAAGCAAAGTTGATGACTCTATTTCCATTGAGGTATTGGGGAACAATGCTATCATGCATTATGGCAGCACTTCAGGCGGCAGTAATAGGCGTATGCATAGATTCCAGCAAACAAGTTTGGAGATTAGAGTGGAATCTACAGCTTATTACTATAATCTACTCGGGAGCATTGGCTACTGCGGCTACATTCTGTTTACTATCGATGGCAATTACACTTAAGGGACCTACTTACCCTCCAATGTTTAATCCACTAGCTCTAATTTTTGTTGCCATATCAGAAGCACTCGTACTTGGTGAACCACTAAAAGTTGGAACGTTGGTGGGCATGGTTTTGATCATATTGGGGTTGTATTTCTTTTTATGGGGTAAAAAGAATGAGATACCACGTTTGCCTCAAACAAATGTAGCAGCTGGTGAATTATCAACAAGCATAACAACTGATGATTCTTTTCAGGCTCAATCAACTGATGTGATAACACCAAGTTCTTTACCTAATAAAACTGTACATCTTGAAATTGAAAAAAGCTGA 1155 0.3879 MSNTTTKSIKEWFKSSEALMSMLLVQLFATGMQLLSRVILVQGTYVFSLLVYRHIVAAFCVAPFALYFERGREKKFNWKVWFLLFLNGLVGMTMALGFFYYGLRDTSATYSVNFLNMVPIFTFMTSIICRMEYLRFGTWGGKAKCIGALLCVGGALVTGLYKGKEFYISHHHAHHSAQTNVVAAHKINMFRGTFFLIASCFSYTAWFILQAKLMTLFPLRYWGTMLSCIMAALQAAVIGVCIDSSKQVWRLEWNLQLITIIYSGALATAATFCLLSMAITLKGPTYPPMFNPLALIFVAISEALVLGEPLKVGTLVGMVLIILGLYFFLWGKKNEIPRLPQTNVAAGELSTSITTDDSFQAQSTDVITPSSLPNKTVHLEIEKS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2622 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 333 - -
Tpr4g2622 384 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Tpr4g2622 384 Pfam EamA-like transporter family 20 157 IPR000620 GO:0016020|GO:0016021
Tpr4g2622 384 PANTHER WAT1-RELATED PROTEIN 16 345 IPR030184 GO:0016021|GO:0022857
Tpr4g2622 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 152 - -
Tpr4g2622 384 PANTHER WAT1-RELATED PROTEIN 16 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2622 Tpr-Chr4 28877333 28888091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2622 1 356 Nodulin-like Gene Family AT5G07050 29.396 2.21e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2622 - - gmx:100782551 520.776