Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2590 ATGAAAATTTCTCGCAGTTTCCTCTTTATGATCATAACCACATCCCTATGCTATCAAACCATAGCTCAACCAGACTTTTACCCATCATGTTACACTGATAATGGAAACTACACAACAAACAGCACATATCAACACAATCTTAACAAACTTTTATCAACTCTCACTTCCAACACAGAAATCACCTATGGTTTCTACAATTTCACCGATGGCGTAGACAACGACAAAGTATACGCCATAGGATTATGCAGAGGAGATGTTAATCCACAAAACTGTCGTAAATGTCTCAACAATTCAAGATATCTTCTAACACAAAATTGTCCAAACAAAAAAGAAGCAATTGGTTGGATTGACGAATGCATGTTGCATTACTCGCATCGATCAATATTCGGACTGATGGAAACAACACCTGGATTTTCTATGTGGAGTCCATATAACGCAACAGATGTGGATGAATATAATAAAGTGTTGGGAAAATTGTTGTATGATTTGAAAAATGAAGCTTCATCTGGTGATTCTATGAAAAAATTTGCTACGGCGAATGTTTCAGGTCCGAATTTTCAGGATATATATAGTCTTATGCAGTGTCCACCTGATGTAAGTTCTATGGATTGTAATCAATGTTTAGATGAAGCTATTGCTCGTCTTCCATCTTGTTGTGAAAATAGGATTGGTGCCAGAGTTGTTAGAGCAAGTTGTACTCTTAGATATGAAAAATATAGGTTCTATGAACTTACCGGTCAACCGCGACAGCCGCCACCACCACCTAATTCACCATCCACTAATAACACTTCCTCTCAAGGTAAAGCTCATACACCAAGAATTATAACAATCATAGGAATTCCGGTTGTTATTGTTGTTTTGGTTCTCTGTTTCATCTGCATCTATTTACGACTACGATTGAAGAAGCCCAATAAAACTACTAAAATTCCGTCAGACGCTGAGGATGAAATTACAACCTTTGAGTCATTACTATTCGACTTTGACACTATTAGAGTTGCTACGAATGACTTCAATGATTCTAATAAACTTGGAGAAGGCGGATTTGGAGCTGTTTATCAGGGAAAACTCTTGAATGGACAAGTGATTGCTGTCAAAAGATTGTCCATGAATTCTGGCCAAGGAGATATAGAATTTAAGAATGAAGTGCTTTTAATGGCCAAACTTCAACACCGAAATTTAGTTAGACTACTTGGTTTTACTATTGAAGGGAGAGAAAGACTACTTGTCTATGAGTTTGTTCCTAATAAAAGTCTTGACTTCTTCATATTTGATCCAATAAAGAAAACACAGTTAGATTGGGAAAAACGCTACAAAATCATTCAAGGTATATCTCGAGGTGTTCTGTATCTTCATGAGGACTCTCGACTCCGTATTATACACCGCGATCTTAAAGCAAGCAACATTCTCTTAGACGGAGACATGAATGCTAAGATATCCGATTTTGGCATGGCAAGACTAATTCTGGTGGATCAAACACAAGCAAATACAAGTAGAATTGTTGGAACTTATGGATATATGGCACCTGAGTATGTAATGCATGGAGAATTTTCAGTGAAATCCGATGTCTTTAGTTTTGGTGTACTAGTTCTCGAGATTATAAGTGGACAAAAGAACAGTGGTATTCGTCATGGGGATGATTCATTGGACCTATTGAGCTTTGCATGGAAAAGTTGGAGGGAAGGAACAGCTGCAAGTATTATTGATTCATCACTATACAACAGTTCAAGAAATGAAATCTTGAGATGCATTCATATTGGTTTACTTTGTGTTCAAGACAATGTAGCTAAAAGACCAACCATGTCCACTGTTGTACTCATGCTAAGTAGCTATTCTCTCAGTCTTTCTATACCTTCAGAACCTGCATTTTTTATGGGCAGTAGAACTAGAAGCCTTCCAGAAATGAGGCTGTGGGAAGAGAACTCAGGGACAACAAAATCAAGCCAATCCACAACCAAATCAGATCGTGAATCATTTAATGAGGCTTCATTTACAGATCCATATCCTCGTTAG 2010 0.3741 MKISRSFLFMIITTSLCYQTIAQPDFYPSCYTDNGNYTTNSTYQHNLNKLLSTLTSNTEITYGFYNFTDGVDNDKVYAIGLCRGDVNPQNCRKCLNNSRYLLTQNCPNKKEAIGWIDECMLHYSHRSIFGLMETTPGFSMWSPYNATDVDEYNKVLGKLLYDLKNEASSGDSMKKFATANVSGPNFQDIYSLMQCPPDVSSMDCNQCLDEAIARLPSCCENRIGARVVRASCTLRYEKYRFYELTGQPRQPPPPPNSPSTNNTSSQGKAHTPRIITIIGIPVVIVVLVLCFICIYLRLRLKKPNKTTKIPSDAEDEITTFESLLFDFDTIRVATNDFNDSNKLGEGGFGAVYQGKLLNGQVIAVKRLSMNSGQGDIEFKNEVLLMAKLQHRNLVRLLGFTIEGRERLLVYEFVPNKSLDFFIFDPIKKTQLDWEKRYKIIQGISRGVLYLHEDSRLRIIHRDLKASNILLDGDMNAKISDFGMARLILVDQTQANTSRIVGTYGYMAPEYVMHGEFSVKSDVFSFGVLVLEIISGQKNSGIRHGDDSLDLLSFAWKSWREGTAASIIDSSLYNSSRNEILRCIHIGLLCVQDNVAKRPTMSTVVLMLSSYSLSLSIPSEPAFFMGSRTRSLPEMRLWEENSGTTKSSQSTTKSDRESFNEASFTDPYPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2590 669 SMART serkin_6 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2590 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 636 - -
Tpr4g2590 669 MobiDBLite consensus disorder prediction 637 657 - -
Tpr4g2590 669 Gene3D - 135 241 IPR038408 -
Tpr4g2590 669 Gene3D - 25 127 IPR038408 -
Tpr4g2590 669 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Tpr4g2590 669 Gene3D Phosphorylase Kinase; domain 1 301 412 - -
Tpr4g2590 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 636 - -
Tpr4g2590 669 CDD STKc_IRAK 343 604 - -
Tpr4g2590 669 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Tpr4g2590 669 Pfam Salt stress response/antifungal 145 239 IPR002902 -
Tpr4g2590 669 Gene3D Transferase(Phosphotransferase) domain 1 413 615 - -
Tpr4g2590 669 Pfam Protein tyrosine and serine/threonine kinase 340 605 IPR001245 GO:0004672|GO:0006468
Tpr4g2590 669 ProSiteProfiles Protein kinase domain profile. 337 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2590 669 SUPERFAMILY Protein kinase-like (PK-like) 316 607 IPR011009 -
Tpr4g2590 669 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Tpr4g2590 669 MobiDBLite consensus disorder prediction 634 669 - -
Tpr4g2590 669 ProSiteProfiles Gnk2-homologous domain profile. 134 241 IPR002902 -
Tpr4g2590 669 MobiDBLite consensus disorder prediction 245 267 - -
Tpr4g2590 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2590 Tpr-Chr4 28465329 28471817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2590 7 626 Receptor kinase-like Gene Family AT4G21410 50.078 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr4g2590 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2590 - - gmx:100782800 790.801