Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2586 ATGGAGTTCCAACTATTCATTGTTCCATTTCTTCTTCTAACCTTCATATCTTCTCTTTTGAACTTGACTCTAGCTGACTTAAACTCTGACAGAAAAGCCCTTCTTGAATTCTCTTCTACTCTCCAACATACCTCAAGATTAAACTGGAACAACTCAACACCAATTTGCACTTCATGGATTGGCATAACTTGCAACCAAAATGAAACAAATGTCATAAGCATCCATCTTCCAGGAATCGGATTAAAGGGCACCGTTCCAAACAACAGCAGCCTAAGAAAACTTGATTCCCTTAAAATCCTAAGCCTTCATTCCAATGAGCTTAGTGGAAATCTACCTTCTAGCATTCTATCTATTCCTTCCCTTCAATATATTAACCTTCAACATAATAACTTCACAGGTCTTGTCCCTTCCTTTATCTCCACAAAACTCATTGCATTGGATCTTTCCTTTAACTCTTTCTTTGGAGCTATTCCTGTTTTCAACCTTTCAAGGCTCAAATATTTGAATTTGAGCTATAATAACTTGAATGGCTCAATTCCATTTTCTATTAATCAATTCCCTTACACTTCTTTTGTTGGAAACTCACTTTTATGTGGTAAACCTCTCAATCATTGTTCAATAATTTCTCCCTCTTCATCTCCTTCGCCGTCAACTACTCAAAACCGAAATGCTACAACTTCAAAGAAATTCTTTGGAGTAGCTTCTATACTTGCTTTTGCAATTGGAGGTATAGCGTTTCTTTCTCTCATAGTTTTGGTGATCTTTGTGTGCTGTTTGAAGAAGAGAAGGAGTAAAAGAAGCAATGATATACCGAAAGGAAAGGCGGAGACCGAGGATTCAATATCAAAGAGTTTTGGAAGTGGTGTGATGGAGGCTGAGAGGAACAAGTTGTTCTTCTTTGAAGGTTGTTCATATTGTTTTGACCTTGAAGATTTGTTGAAGGCTTCAGCTGAAGTACTTGGAAAAGGAAGCTATGGTGGAACAACATATAGAGCTACATTGGAGGAAGGAATAACAGTTGTGGTTAAAAGGTTAAGGGAAGTTGTGGTTGGAATGAAGGAGTTTGAGCAACAGATGGAGGATGTTGGACGAATTGGAAGACATTCCAATGTCATACCACTTAGAGCTTATTACTATTCAAAAAATGAGAAACTTCTTGTTTATGATTACATGCATGGAGGAAGCTTGTTTTCCTCACTTCATGGAAACAGGGGAGTAGGAAGAACTCCATTAAACTGGAATTCTAGAATGAAGATTGCACTAGGAGCTGCGAAAGGAATTGCTTCCATCCACACAGAAGGAGGTTCAAAATTTATTCATGGCAACATAAAGTCAACCAATGTACTCATAACACAAGAACATGATGGTTACATCACCGATGTAGGACTCACTCCCCTAATGAACACCTCATCAGGTTCAATCATGTCCAGATCCAATGGCTACCGTGCTCCAGAATTGGTGGCCGAGTCAAGGAGGACCGCCACTCAGAAGAGTGATGTTTACAGCTTTGGTGTGCTCCTTCTTGAAATGCTTACAGGGAAGATTCCACTTGGATATTCTGGTTATGATCATGACATGGTTGATCTTCCAAGGTGGGTTAGGTCGGTGGTCCGTGAGGAATGGACAGCTGAAGTTTTCGATGAGGAGATGATTAGAGGAGGAGAATATGTTGAAGAGGAGATGGTACAGATGCTTCAGATTGCATTGGCTTGTGCGTCAAAGTTGGTAGATGATAGGCCAACAATGGATGAAGTTGTTAGAAAAATAGTGGAAATTAGACAGCCTGAGTTGAAGAAAAGTACATCTTCAGAATCTGAGTTTAATGTATAA 1830 0.3929 MEFQLFIVPFLLLTFISSLLNLTLADLNSDRKALLEFSSTLQHTSRLNWNNSTPICTSWIGITCNQNETNVISIHLPGIGLKGTVPNNSSLRKLDSLKILSLHSNELSGNLPSSILSIPSLQYINLQHNNFTGLVPSFISTKLIALDLSFNSFFGAIPVFNLSRLKYLNLSYNNLNGSIPFSINQFPYTSFVGNSLLCGKPLNHCSIISPSSSPSPSTTQNRNATTSKKFFGVASILAFAIGGIAFLSLIVLVIFVCCLKKRRSKRSNDIPKGKAETEDSISKSFGSGVMEAERNKLFFFEGCSYCFDLEDLLKASAEVLGKGSYGGTTYRATLEEGITVVVKRLREVVVGMKEFEQQMEDVGRIGRHSNVIPLRAYYYSKNEKLLVYDYMHGGSLFSSLHGNRGVGRTPLNWNSRMKIALGAAKGIASIHTEGGSKFIHGNIKSTNVLITQEHDGYITDVGLTPLMNTSSGSIMSRSNGYRAPELVAESRRTATQKSDVYSFGVLLLEMLTGKIPLGYSGYDHDMVDLPRWVRSVVREEWTAEVFDEEMIRGGEYVEEEMVQMLQIALACASKLVDDRPTMDEVVRKIVEIRQPELKKSTSSESEFNV* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2586 609 Gene3D Phosphorylase Kinase; domain 1 281 390 - -
Tpr4g2586 609 ProSiteProfiles Protein kinase domain profile. 314 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2586 609 Gene3D Transferase(Phosphotransferase) domain 1 391 608 - -
Tpr4g2586 609 SUPERFAMILY L domain-like 40 199 - -
Tpr4g2586 609 SUPERFAMILY Protein kinase-like (PK-like) 318 588 IPR011009 -
Tpr4g2586 609 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Tpr4g2586 609 Pfam Protein kinase domain 318 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2586 609 PANTHER LRR RECEPTOR-LIKE KINASE 5 609 - -
Tpr4g2586 609 PANTHER OS05G0588300 PROTEIN 5 609 - -
Tpr4g2586 609 Gene3D Ribonuclease Inhibitor 26 206 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2586 Tpr-Chr4 28415264 28435166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2586 6 593 Receptor kinase-like Gene Family AT3G08680 53.612 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g2586 Pkinase 6.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2586 - - cam:101501552 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2586 4 28415264 28435166 Tpr3g2986 3 32282659 32287727 PCT