Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2585 ATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGACATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGACAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACTGTTGTAAACGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATTTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGATAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTAAAATGCAACACCTCTCCAAAAGACTTGTCGAGAATGAGTATTTTTTCAAACATAGAACGGTTGTTGCAGACGGATCCGAACATGTTCAAGACATTTTCTTTGCACATCCTAGATCTATAAGCTTTTTCAATTCTTTTCCTACTGTTCTTTTGATGGATTCGACATACAAAACAAACAAATACAAAATGCCGTTATTTGATATTGTCGGATTCACATCAACTGGGAGAACTTTCAATGTTGGATTTGCTTGGCTTACCAATGAAAAAGAAGACAACTTCACTTGGGCTCTAGAGCAGTGTGTCAGTCTTTTAAGGAATGAGGACGTTAGACCGAAGGTGATTGTCACCGATAGGTATTTGGCTCTGATGAATGCAGTTGCCGAGGTATTTCCAACATCGGCTGCAATGGTTTGTCGTTTTCATGTAAAAAAGAATGTGAGCTCTAAGATGAAGGAAGTTGTGAAAATCAAGAATGGAGAGAATGAGAAGCAGACTGATGTGTGGGATCAAATCACCGCTGCTTTTAATGATGTGTTAGAGTCGCCCACGGAGAAAGAATATGCTGACAATGTTATGGTGTTTAGGGAGCTTTGTGCGAGGTGGCCAAAGTTTTTGCGTTATGTTGAAGAGACTGTCCTAGACACTGATAAAGAAAAGGTTGTCAATGCTTGGGTAGACCAACATATGCACATGGGGAATCACACCACGAATAGAGCTGAATCATGTCATGGTGTGTTGAAAGGTTACTTGAAGGACGGTAACGGTGACTTGGTGAAAGGATGGGAAGCGATAAATAAGATGTTGATAAGTCAGTTCACCGAAGTACAAGGTGAATTCGGTCGGAGTATGTCCGTTGCGGAACACAAATACGATGATGATCATCTTTACGCATACTTGTTTTATAAAATCTCTAGAAAGGCTATGGATCACATTTATGCCGAAGCAAACAGGGTCGACGAATGTGGTATGGATAGCAAAAAGTGTGGCTGTGTTATGAGAAGGACATACGGGTTGCCATGTGCATGCTTGATTGCGAAGAAGATAAAAAATAACAAACTTATCCGACTGGATGAGATTCACCCTCAATGGAAGAAACTGTGTTTCGAAGATGAACCGGCACCGGGCGACGTGGCTGACGATTATGCTTGCTTGGCTGAGTGGAAAACAATTCAGGAACGATTAAAAACAGCCGATGTTAGCGTGAAGAATGATATTAGGAATCAACTTCGTCTCATTGCATATCCAGAAACCACCTCTGTGAAACCTCCGCTTCAAAAGGCAAAAACAAAAGGTGCTAAAAAGAAAAAATCAGTTCGTGTCACAAGATCCACGAGCAGGGATAAGTCTCGGTGGGAGCATGTTGATGATCATATTGCAGCTACACAGGCATCTCAATCAAAACCAACAAAGTCAAAGCCGTCGACTTCACAAACAGTGCCTGGGGTGCCTAAAGAACTCGTCATCAGTACTTTGACTCCAGCTCCTCCTGAAATTCCTTTTATCAACCATATGCCGAAGTTCATGCACCCATTTATCGAAGATATTATTGATGTTGATGGTGACAGTTATTGTGGATACCGTGTGGTAGCTTTGCACCAAAAAGGAACTCAGCAAGATTTTGAGTTGATCAGACTGAACATGGAGAGGGAGCTGAGATTGCATAAGGAATCATATGTGGAGTTGTTCGATACTGATGAGCGTTACAAGTATGTCACAGATGCACTTTTCCCACCTCTGAGAAGGAGTAAACATGCTTTTGCACCAAAGGACAAATGGTTTACTTTTCCGGATATGAGTTACGTTGTGGCTACTCATTTTCAGAGGGTTGTTGTTCAACTGTCAAATATGGAAAGATGTGGAGCATCTAGAACTTGTTTCCCATTGCGTGGCAAACCTCCATCAGACGAGTCAGACTTGGATTCCAAGATTATTTGCATCGGCGCGCTCGCTGACCACTTTGTGTTAGTGCGGTTGAAAGAAGGATGTCCGATACCTCCAACGGCTCATCAGTGGAAAAACTATTGTTCTGAAGAAGCTGCAGAATAG 2538 0.4247 MATPDRDELIRWARDIALKLKFAIVIGKSDNDSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAKQLYNLSHRLKLKMRASMTKMQHLSKRLVENEYFFKHRTVVADGSEHVQDIFFAHPRSISFFNSFPTVLLMDSTYKTNKYKMPLFDIVGFTSTGRTFNVGFAWLTNEKEDNFTWALEQCVSLLRNEDVRPKVIVTDRYLALMNAVAEVFPTSAAMVCRFHVKKNVSSKMKEVVKIKNGENEKQTDVWDQITAAFNDVLESPTEKEYADNVMVFRELCARWPKFLRYVEETVLDTDKEKVVNAWVDQHMHMGNHTTNRAESCHGVLKGYLKDGNGDLVKGWEAINKMLISQFTEVQGEFGRSMSVAEHKYDDDHLYAYLFYKISRKAMDHIYAEANRVDECGMDSKKCGCVMRRTYGLPCACLIAKKIKNNKLIRLDEIHPQWKKLCFEDEPAPGDVADDYACLAEWKTIQERLKTADVSVKNDIRNQLRLIAYPETTSVKPPLQKAKTKGAKKKKSVRVTRSTSRDKSRWEHVDDHIAATQASQSKPTKSKPSTSQTVPGVPKELVISTLTPAPPEIPFINHMPKFMHPFIEDIIDVDGDSYCGYRVVALHQKGTQQDFELIRLNMERELRLHKESYVELFDTDERYKYVTDALFPPLRRSKHAFAPKDKWFTFPDMSYVVATHFQRVVVQLSNMERCGASRTCFPLRGKPPSDESDLDSKIICIGALADHFVLVRLKEGCPIPPTAHQWKNYCSEEAAE* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2585 845 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 34 526 - -
Tpr4g2585 845 MobiDBLite consensus disorder prediction 623 645 - -
Tpr4g2585 845 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 526 IPR031052 GO:0006355
Tpr4g2585 845 MobiDBLite consensus disorder prediction 606 621 - -
Tpr4g2585 845 Pfam MULE transposase domain 213 309 IPR018289 -
Tpr4g2585 845 MobiDBLite consensus disorder prediction 591 605 - -
Tpr4g2585 845 Pfam Transcription factor AFT 46 96 IPR014842 GO:0000981|GO:0036086
Tpr4g2585 845 MobiDBLite consensus disorder prediction 586 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2585 Tpr-Chr4 28411298 28413971 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g2585 MULE 1.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2585 - - gmx:100800409 531.561