Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2584 ATGGCTACCAATCAAGGTGTTCTTTCATCTCTTGACAATGCTAAAACCCAAAGCTACCATTACATGGCAATAGTGATAGCAGGAATGGGATTTTTCACCGATGCATACGATCTCTTTTGCATCACCGCAGTTACAAAGCTTATCGGTCGTTTGTACTACTCTGATCCGACTAGCCATCTTCCAGGAATACTTCCAACAAACGTAAACAATGCAATAACCGGTGTCGCATTGTGTGGTACCCTTGCAGGACAACTCTTCTTTGGCTGGCTTGGAGACAAACTTGGTAGAAAAAAAGTTTATGGCATAACTCTTACCACAATGGTTGGTTTTGCTTTACTATCAGGTCTTTCGTTTGGTTCCACGCCGAAAACTGTGGTTACTAGTCTTTGTTTCTTTAGATTCTGGCTAGGATTCGGCATCGGTGGAGACTATCCTCTCTCAGCAGTGATCATGTCTGAATATGCAAATCAAAAAACAAGAGGAAGTTTTATTGCTGCGGTTTTCGCTATGCAAGGAGTTGGAATATTGGTTGCCGGAGGCGTGGCCATGTTTGTCTCGAAACTATTCTTATCGGCTTTTCCAGCTCCTGACTTTGAAACTAATCCTGTTTTATCCACTCAACCAGAAGGAGATTTTGTTTGGAGAATTGTGTTGATGTTTGGCGCAGTTCCCGCGGCTTTAACTTATTATTGGAGAATGAAAATGCCAGAAACCGCAAGATACACTGCTTTGGTTGAAGGAGATCACAAGAAAGCCGCTGAAGATATGGCGAAAGTTCTTGATAAGAACATACTTGTAGAAGAATCTAATACCAAGATTGCTATCGGTCCACTCGCTTCAAGCTCCTATGGGCTCTTCTCTTCAGAGTTTCTTGAAAGGCATGGACTTCACCTTCTAGGAACAACTAGCACATGGTTTTTATTGGATATTGCTTTCTACAGTCTTCAACTGACACAAAAAGATATTTATCCAGCTAGTGGACTTGTATACAAGGCTTCCAAAATGAATGCTATTGAGGAAGTGTTTCAACTCTCTCGAGCGATGTTCGTGGTTGCCTTGCTCGCCACGGTACCTGGATACTGGGCCACCGTTTTCCTAATTGACAAGATCGGACGGTACAGAATTCAGCTTGTTGGATTCCTTGTAATGTGTGTTTGTATGTGGTTTCTTGGACACAATTATAGAGACTACAGGGGAGAAGCATCAAATTGCAAGAAAGAATCAAAATATGACTATTGTGGTGGAAACCTTGTCATGTTTGCTATACTTTTTGGACTTACACTTTTCTTTGCTAACTTTGGACCTAATAGTACTACATTTATAGTGCCGGCAGAACTGTTCCCTGCGAGGCTCCGTTCAACGTGTCACGGGATATCGGCGGCAGCTGGAAAATCGGGAGCTATCCTCGGTTCTTTTGTGGTGCAAAGCTATATAAATGATGGACATGATAAAACAAAAAGAATTAAGAAGGCAATTATGGCGCTTTCGTTTGTGAATTTGCTTGGATTCTTTTGCACTTTCTTGGTGCCAGAAACACAAGGTCGATCACTCGAAGAAATTTCGGGAGAGGATAAAGAAATCCAAGGAAACATTGCAGATGAGGCAATAAATGATGCAAAAGAGGGAACAATAAACATTAGTGTCGATAAATCTCCAAGAACTTCAATGGTTTAG 1674 0.4164 MATNQGVLSSLDNAKTQSYHYMAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYSDPTSHLPGILPTNVNNAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLTTMVGFALLSGLSFGSTPKTVVTSLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGSFIAAVFAMQGVGILVAGGVAMFVSKLFLSAFPAPDFETNPVLSTQPEGDFVWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGDHKKAAEDMAKVLDKNILVEESNTKIAIGPLASSSYGLFSSEFLERHGLHLLGTTSTWFLLDIAFYSLQLTQKDIYPASGLVYKASKMNAIEEVFQLSRAMFVVALLATVPGYWATVFLIDKIGRYRIQLVGFLVMCVCMWFLGHNYRDYRGEASNCKKESKYDYCGGNLVMFAILFGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKSGAILGSFVVQSYINDGHDKTKRIKKAIMALSFVNLLGFFCTFLVPETQGRSLEEISGEDKEIQGNIADEAINDAKEGTINISVDKSPRTSMV* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2584 557 Pfam Sugar (and other) transporter 24 521 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr4g2584 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 513 IPR020846 GO:0022857
Tpr4g2584 557 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 536 - -
Tpr4g2584 557 CDD MFS_PhT 24 512 - -
Tpr4g2584 557 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Tpr4g2584 557 Gene3D MFS general substrate transporter like domains 268 538 IPR036259 -
Tpr4g2584 557 SUPERFAMILY MFS general substrate transporter 12 522 IPR036259 -
Tpr4g2584 557 PANTHER PHOSPHATE TRANSPORTER 6 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2584 Tpr-Chr4 28381632 28383305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2584 1 523 Inorganic Solute Cotransporters AT5G43360 61.163 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2584 K08176 - gmx:100820250 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2584 4 28381632 28383305 Tpr4g2584 4 28381632 28383305 ECH