Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2573 ATGGAACCACATCTGAATGCAGCAGCCTCGTCCATGCTGAGAAGCAGCAGAAACATACCTTGTCTTCATCAACCATTGCTAGTTCTTACTACCAGGATGCTTTCTTCTTCACCACCATCATCTTCTTCTGTAACTTCTTCATCTGAAACAAGACTAGGTTATTCTTCTATAAACCCTAAACCTTCATTCAAGAACCTTTCTCTATTCTCAAACAATCATTCTCTTCAAAGCATGACGACGGTTTCAAATTGTTTATCTCAGTCTGATGCAATACCGGTTTCTGAATCTGATTCAATAGATTCTCTTGTTGTGGTTTCGTTTTATAAGTTTGCGGATTTCCCTGACCATGCTGTTTTGCGTAATCCATTGAAACAACTCTGTCAAGAACTGCGTGTTTCAGGCGGTATCATTCTTGCGCCTGAAGGAATTAATGGAAGCCTATGTGGCACGAGGGAGTCGGTGGAGAAAGTTCTTGCATTTATTCAGAGTGATGATCGTCTGAAAGGTCTAAGACGTATTGAATCTCCTGTCAGTCCTGAGGAGGAGGCCATCCATCAGGAACATCATGGACACAGTGCCAGTTCTCCTCTTGCTGCTGGGGAGGATGTACCTTTCCGATGGGATCATGTGAGAGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTACAGTATCACCTATGGAAAGGGTTGGAAAATATATTAGCCCAAAGGAATGGAATTCTTTGATTAGTGATCCTGATACAGTGGTAATTGATGTGCGGAATAACTATGAAACGAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCATGTACAACGTCATTTCGTGAATTCCCATCTTGGGTGGAGGAACGTTTCGAGCTTACCAGAACAGATGCTGAGCATCCAAAAGTTGATGTAAACCAGTCAGACCAAAGTGCTGAAAAAGAAACAGAGAATCCGAAACAACATTTGCCACGGGTTGCAATGTATTGCACTGGGGGTATTCGATGTGAGAAAGCTTCAAGTTTACTTCTCAGCAAAGGTTTTAAAGAGGTTTATCACCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCAGAGAGACAAAGTCTCTGGGAAGGAGAGTGCTTTGTTTTCGACAAGCGAGTCTCTGTCGAGCATGGTTTGGCAACAGGAAATTTCAAGCTTTGCTACGGTTGTAAGCAGCCTGTGAGTGATGCAGACATGGAATCCCCAGAATATGAATATGGAGTCTCCTGTCCTTACTGTTTTGCACAGAAATCAGAAGAAGAGAAGGAGAGGGCTCGAGCTCGACAAAAACAATTTGAGAGATGGGGGATCATAGGTGGTCCTGATAAGGGCCGTCGGCCGACACAGGAGTCAGACGGTGCTAGCAGCAATCAAAATCAACTTTCAAAGTCTGTTTAA 1419 0.4327 MEPHLNAAASSMLRSSRNIPCLHQPLLVLTTRMLSSSPPSSSSVTSSSETRLGYSSINPKPSFKNLSLFSNNHSLQSMTTVSNCLSQSDAIPVSESDSIDSLVVVSFYKFADFPDHAVLRNPLKQLCQELRVSGGIILAPEGINGSLCGTRESVEKVLAFIQSDDRLKGLRRIESPVSPEEEAIHQEHHGHSASSPLAAGEDVPFRWDHVRVKLKKEIVTLGMPTVSPMERVGKYISPKEWNSLISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEERFELTRTDAEHPKVDVNQSDQSAEKETENPKQHLPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPERQSLWEGECFVFDKRVSVEHGLATGNFKLCYGCKQPVSDADMESPEYEYGVSCPYCFAQKSEEEKERARARQKQFERWGIIGGPDKGRRPTQESDGASSNQNQLSKSV* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2573 472 Pfam UPF0176 acylphosphatase like domain 103 218 IPR040503 -
Tpr4g2573 472 Gene3D - 92 219 - -
Tpr4g2573 472 MobiDBLite consensus disorder prediction 431 472 - -
Tpr4g2573 472 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 99 453 - -
Tpr4g2573 472 Pfam Rhodanese-like domain 237 360 IPR001763 -
Tpr4g2573 472 ProSiteProfiles Rhodanese domain profile. 246 367 IPR001763 -
Tpr4g2573 472 SMART rhod_4 236 364 IPR001763 -
Tpr4g2573 472 MobiDBLite consensus disorder prediction 177 197 - -
Tpr4g2573 472 CDD RHOD_YceA 233 360 - -
Tpr4g2573 472 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 99 453 IPR020936 -
Tpr4g2573 472 MobiDBLite consensus disorder prediction 294 317 - -
Tpr4g2573 472 Hamap tRNA uridine(34) hydroxylase [trhO]. 100 404 IPR020936 -
Tpr4g2573 472 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 215 391 IPR036873 -
Tpr4g2573 472 MobiDBLite consensus disorder prediction 457 472 - -
Tpr4g2573 472 Gene3D - 220 402 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2573 Tpr-Chr4 28265415 28270134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2573 76 459 Sulfurtransferasese or Rhodanese AT2G40760 73.214 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2573 - - mtr:MTR_5g067730 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2573 4 28265415 28270134 Tpr4g2573 4 28265415 28270134 ECH