Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2568 ATGGAAGAGGTCATGAATTTCATCACGCGTGCTTTTGAATTGGCCAAAGATCATGAACAAGAACTACCAAACATTGCCAACAACCCTGAAATGCTATTCTCATCCATTGATGAGGTTGAAAAAGCATTTTCTTCTGCAAAAGAAAGATTAATGATGATGTTGTCATCACAACATGACACAACAACAACAACAACAACAACAACAACAAAAGGTTCTAATTCCTTTGCTCAAATTTTGTCTCATGATGTTTTCATGCAAAACAATCATGATCATCATGGTCAAATGGGTGGAAGTGGAAATTCAATGCATGCACATTCAATGAATCAATTGCTTCTAATGCAACACTCTTTTGAGATGCTAAGGTCTAGGGGAACTTTGATGATTGGCGAAATGGGCGGGAGGGATGTCGAAGGTTTAGAGATATCAAAAGGGTTAGAAGGAGAAATGCAAGGAATAGAAGAATCACCATCACGACCGAAAAAAAGCAGCAGGAAGAATGATATGGAGAAGAGAACAGAGATGTTTCCAGCACCTCAAATTGGAAACACTGAAATGCCACCAGAAGATGGCTTCACTTGGAGAAAATATGGACAAAAAGAGATACTTGGCCGCAAGTATCCAAGGAGTTACTATAGGTGCACACACCAAAAATTATATTTATGTCCAGCCAAGAAACAAGTACAAAGACTTGATAACAATCCTAACATAGTTGAAGTGACGTATAGAGGTGAACACATTTGTCACAAATCCTTAACAGCACCATCATCATATCCACCACCACCAAACCTACTTGTCAACATCAATACTACTCAAGCTACCATTCCTCCAGAGGCGTGGCCGCCAGCAGTGAACCTCGGCCTCAGGGGTGGAAACAGTAGCGGCGGACCGTCTACTTCAAGATTCGGTATTGATTATCCGGTAGCCGATATGGCTGATGCAATGTTCAACTCAGGTAGTAGTAGTGGCAATAGCATGGAATCACTTTTTCATCCAAGTGATGATAAATGGGAACCTGATGAAAAGATAAACTGA 1032 0.406 MEEVMNFITRAFELAKDHEQELPNIANNPEMLFSSIDEVEKAFSSAKERLMMMLSSQHDTTTTTTTTTTKGSNSFAQILSHDVFMQNNHDHHGQMGGSGNSMHAHSMNQLLLMQHSFEMLRSRGTLMIGEMGGRDVEGLEISKGLEGEMQGIEESPSRPKKSSRKNDMEKRTEMFPAPQIGNTEMPPEDGFTWRKYGQKEILGRKYPRSYYRCTHQKLYLCPAKKQVQRLDNNPNIVEVTYRGEHICHKSLTAPSSYPPPPNLLVNINTTQATIPPEAWPPAVNLGLRGGNSSGGPSTSRFGIDYPVADMADAMFNSGSSSGNSMESLFHPSDDKWEPDEKIN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2568 343 MobiDBLite consensus disorder prediction 145 186 - -
Tpr4g2568 343 MobiDBLite consensus disorder prediction 153 172 - -
Tpr4g2568 343 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 260 IPR044810 GO:0003700
Tpr4g2568 343 SMART WRKY_cls 187 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2568 343 ProSiteProfiles WRKY domain profile. 188 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2568 343 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 260 - -
Tpr4g2568 343 Pfam WRKY DNA -binding domain 188 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g2568 343 Gene3D WRKY domain 177 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2568 343 SUPERFAMILY WRKY DNA-binding domain 184 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g2568 343 MobiDBLite consensus disorder prediction 319 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2568 Tpr-Chr4 28180601 28184828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2568 1 333 WRKY Transcription Factor Family AT2G40740 35.988 6.72e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr4g2568 WRKY 7.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2568 - - mtr:MTR_5g067680 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2568 4 28180601 28184828 Tpr4g2568 4 28180601 28184828 ECH