Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2565 ATGGTAAAAATTGATGAATCTCTAGATGTTGATTCGAATGAAGTTAGTTCAACCGATAGTCATACATCTGATGATGAGGATTCCAGCTATTCGGTGTCCGGTGGGCATGATAGGTCAGATGATGGCGATGATACTGGTGACCACCATGATGATGATGATGATGGTGATGATGATGATGATGATGATGATGATGATGATGATGACCATGATTTTGGTGATGAAGCATCTATAGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTGATGAAATTCGTGGTATGGAATTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGACAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCATAGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCGATAAAGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAAATTAGCGAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCTGACACTAGCAATGGACGGATGAAGTCTCTTTTTTGGGCTGATGGGACCAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACAAGAGGAACAAATACAACCTCCCGCTGGTTATATTTTCAGGTTGTAACCACCATTCCCAAACAATAATTTTTGGCGCTGCGTTGGTATCAGATGAAACCACGGAGACGTATAAGTGGGTGTTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCCAAAAGCTGTGGTGACAGATGGAGATGGGGCTATGAGGGAGGCTATAAAAGAGGTTTTCCCCGATGCGACCCATCGGTTATGTGCCTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAATTCAGGTTTTTTGAAGGGATTTAAAAAAGCCATGTTCTCAAATTTTTCAAAGGATGATTTTGAAGAGTATTGGTCAGAGATGATTAAAGAAAATGGAGTTGAAGGACATCCTTGGGTTATCAAAACCTACGAGAACAAGTTACTATGGGCAACTGCATACCTGCGGGATAAGTTTTTTGGACGTATAAGAACTACGTCTCAATGTGAAGCAATCAATGCAATAATAAAGAGTTATGTCAGAAAGAAAGGATGCATCTTTGAATTTATGCAAAATTTTGAGCAGGCTCTAAGAGGCTACAGAAACAATGAACTTGTTGAAGATTTTAAGTCAAAGTTTTCAGAACCTGTGTTGACAACTCAACTACGTTTGATTGAGAGCAATGCCGCTAAAATCTATACAGCGGAGATTTTCAAAGAAGTGAAAGAAGAAATTATGAAGGCCGGTGAATTGATTGTTAAGCATAAAAAGGAAATTGGAGATACTAAGTTTTATACTTTGACTAAATATTGTCGGGATGTGTATGAAAGAACAGTTGTTTACGATGGTGATACATTCCAATGTTCGTGCCGGTTGTTTGATTCTCGTGGACTTCCTTGTTCTCATATTTTTCACGTGATGAAGGAAGAACATGTTGATCACATTCCTAGCACTTTGGTATTGTCGCGATGGACCAAGGATGCTAAAATTGATTATTTGAACATGGTGGATGTTAATGATCCAGTTGATTCCGATGTGATTGAGCTTGCCCGTTTTGGTGCATATTGTTCTGTTCTGACATCATTTTGCAAAGAAGCTTCTAAAAAGAATGGTGTGTATGGTGACATTATGGATGACCTCATGAATTTAAAAAAAAAATATTGCAGTGTTGAGGATCCTATTGGAACACAAAAGTCAGTTGTTGGTGATCCTATCCCGGTTCAGAGTAAAGGTGCTCCAAAGAAAAAAAAGAATGACGCAAAAGCTCTCAGGCATTGTACTCATTGCAAGAGTACAACTCATAATGCGAGGACTTGTTCGGACAAAAAGAGAAAAAAAAGTTGCAACACTGAAAGTAGTGTGCAAGACATAAATTCAGAGCTACCGGTTGACGTTGGTGAAAGTAGTGTGCGACAGAAAAAGAAGAAATGTGCAGAGCAACCGAAAGACCTTTGCGAAAGTAGAGTGGCACCAAAAAAGAAGAAATGTTCAGAGCTACCGAAAGATCGTTGTGAAAGTATTGTGCAAAAGAAAAATAAATGTTCGGTGCAACTGAAAGAGCGTGGCGCTAATGTGTCAACACCAACACATATTGATGTTACTAGTGCGACCGGGCAATTCACTCCGATGTATGGATTTCAACATATGATTCCTATGTTACATCCGGTTATGCAACAGATGCACGTACCATCTGGACAACATGTTCCACCTGCACAACATGTAACTTCTGTACCACATGTACCACCTATATACCAAATGTATGGAATGAATGTTGGTGCAAATTCAACTTCGTGTTATGGTCTGTTACAACAGGTGATGAAATCTGCTGATGGACAACAATGA 2808 0.3896 MVKIDESLDVDSNEVSSTDSHTSDDEDSSYSVSGGHDRSDDGDDTGDHHDDDDDGDDDDDDDDDDDDDHDFGDEASIGERAVRINSMTADEIRGMEFGSVDEAYEFYYQYGKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCSRQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKADKGRFVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYKRNKYNLPLVIFSGCNHHSQTIIFGAALVSDETTETYKWVLNCFLECMENKRPKAVVTDGDGAMREAIKEVFPDATHRLCAWHLNKNAGENVKNSGFLKGFKKAMFSNFSKDDFEEYWSEMIKENGVEGHPWVIKTYENKLLWATAYLRDKFFGRIRTTSQCEAINAIIKSYVRKKGCIFEFMQNFEQALRGYRNNELVEDFKSKFSEPVLTTQLRLIESNAAKIYTAEIFKEVKEEIMKAGELIVKHKKEIGDTKFYTLTKYCRDVYERTVVYDGDTFQCSCRLFDSRGLPCSHIFHVMKEEHVDHIPSTLVLSRWTKDAKIDYLNMVDVNDPVDSDVIELARFGAYCSVLTSFCKEASKKNGVYGDIMDDLMNLKKKYCSVEDPIGTQKSVVGDPIPVQSKGAPKKKKNDAKALRHCTHCKSTTHNARTCSDKKRKKSCNTESSVQDINSELPVDVGESSVRQKKKKCAEQPKDLCESRVAPKKKKCSELPKDRCESIVQKKNKCSVQLKERGANVSTPTHIDVTSATGQFTPMYGFQHMIPMLHPVMQQMHVPSGQHVPPAQHVTSVPHVPPIYQMYGMNVGANSTSCYGLLQQVMKSADGQQ* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2565 935 MobiDBLite consensus disorder prediction 18 45 - -
Tpr4g2565 935 PANTHER OS02G0262500 PROTEIN 91 759 - -
Tpr4g2565 935 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 91 759 IPR031052 GO:0006355
Tpr4g2565 935 ProSiteProfiles Zinc finger SWIM-type profile. 597 633 IPR007527 GO:0008270
Tpr4g2565 935 Pfam MULE transposase domain 322 416 IPR018289 -
Tpr4g2565 935 Pfam FAR1 DNA-binding domain 105 199 IPR004330 -
Tpr4g2565 935 MobiDBLite consensus disorder prediction 46 66 - -
Tpr4g2565 935 MobiDBLite consensus disorder prediction 1 66 - -
Tpr4g2565 935 SMART 26again6 608 635 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2565 Tpr-Chr4 28107666 28111360 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g2565 FAR1 1.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2565 - - ccaj:109792835 881.708