Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2564 ATGCCGAATCCCAATACAAATCAAAATCATCCTCATCCACACCGTTCCAAAACTCGACCGCCCACGTCATCATCTCGACCATCCACGTCATCATCCCGACAACAACAACAACCACCACCACCAGTTCAACCACGAGTTCCGTTACGGCAGTTACTCCGAGTAGCATCAGTAGCAAGCGGAATTCAATTCGGTTGGGCTTTACAGCTTTCACTATTAACACCATATGTTCAACAATTAGGTATCCCTCATCAATGGGCGAGTATAATCTGGCTATGTGGACCGGTTTCCGGTTTATTTGTTCAACCGTTAGTCGGTCATTTAAGTGACCGATGTACGAGTAAATTCGGTCGCCGGAGACCGTTTATTGTCTTCGGCGCCGCTTCGATAGTTATTGCTGTTATTATTATTGGTTATGCTGCTGATATTGGTGGATTGATTGGTGATGATGTTGAACAAAGCTATCGTCCTTTTGCTATAACTGTTTTTGTTATTGGATTTTGGATTCTTGATGTTGCTAATAATGTTACTCAAGGTCCTTGTAGAGCTTTACTTGCAGATCTCACAAGAAATGATGCTCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCCATTGGTAACATTCTTGGCTATGCAACCGGGTCATACAGTGGCTGGTACAAGATTTTTAAATTCACACTTACCCCTGCTTGCTCTATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACGTTGCTTTCATTGCGGTAACGACATATCTCAGCATTGTGTCAGCTCATGAAGTGCCTCTAAGTTCAAGTGGAGCAGTACATGCTGGAGAAGGAGCAGGAGAGACAGAAGAAGCTTTCATGTGGGAATTGTTTGGGACATTCAAATATTTTTCAACACCTATATGGATAGTACTGTCTGTAACTGCTCTGACATGGATTGGGTGGTTCCCATTTATTCTCTTTGATACTGATTGGATGGGTCGGGAAATTTACGGTGGTGATCCAAATGGAGGCCTTATTTATGATACTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGGAGTAACATCATTGCTTATGGAAAGGCTATGCAGGAAGCGAGGGGCTGGTTTTGTGTGGGGAATCTCAAATATATTTATGGCTCTTTGCTTTATAGCAATGTTAGTATTAACCTATGCGGCAAATAGCATTGGCTACGTAAGTAAAGGTCAACCACCACCAACAGGCATTGTGATTGCAGCGTTAGCAATCTTTACCATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCTACGCATATCGAACCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTAAATCTGGCTATAGTGGTCCCACAGATTGTGGTGTCCTTGGGAAGTGGACCGTGGGATCAGTTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTGGCAGCTGTTGCAGCCCTTTTCAGTGGACTCTTGGCTCTATTAGCTATTCCCCGAACTCGAACCCAAAAGCCTCGAAGCCGTGTATGA 1566 0.4374 MPNPNTNQNHPHPHRSKTRPPTSSSRPSTSSSRQQQQPPPPVQPRVPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHLSDRCTSKFGRRRPFIVFGAASIVIAVIIIGYAADIGGLIGDDVEQSYRPFAITVFVIGFWILDVANNVTQGPCRALLADLTRNDARRTRVANAYFSLFMAIGNILGYATGSYSGWYKIFKFTLTPACSISCANLKSAFFLDVAFIAVTTYLSIVSAHEVPLSSSGAVHAGEGAGETEEAFMWELFGTFKYFSTPIWIVLSVTALTWIGWFPFILFDTDWMGREIYGGDPNGGLIYDTGVRMGALGLLLNSVVLGVTSLLMERLCRKRGAGFVWGISNIFMALCFIAMLVLTYAANSIGYVSKGQPPPTGIVIAALAIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVVPQIVVSLGSGPWDQLFGGGNSPAFAVAAVAALFSGLLALLAIPRTRTQKPRSRV* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2564 521 MobiDBLite consensus disorder prediction 20 36 - -
Tpr4g2564 521 CDD MFS_SLC45_SUC 51 507 - -
Tpr4g2564 521 Gene3D MFS general substrate transporter like domains 48 270 IPR036259 -
Tpr4g2564 521 Gene3D MFS general substrate transporter like domains 297 518 IPR036259 -
Tpr4g2564 521 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 22 519 - -
Tpr4g2564 521 PANTHER SUGAR TRANSPORTER 22 519 - -
Tpr4g2564 521 SUPERFAMILY MFS general substrate transporter 49 515 IPR036259 -
Tpr4g2564 521 MobiDBLite consensus disorder prediction 1 44 - -
Tpr4g2564 521 Pfam MFS/sugar transport protein 66 214 - -
Tpr4g2564 521 TIGRFAM GPH_sucrose: sucrose/H+ symporter 46 514 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2564 Tpr-Chr4 28069770 28085384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2564 5 517 Sucrose Transporter Gene Family AT1G09960 69.201 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2564 K15378 - gmx:100820483 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2564 4 28069770 28085384 Tpr4g2564 4 28069770 28085384 ECH