Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2556 ATGGAGCATCAATCCCTCACTTCTCATCCCAATTCCCCTGATTCATCCCCTAACTCTCGCGAATTGCTCGAAAACAACGATCACCGTTCACCATTCGATGAACATCCACCACAACCACCACCTTCCAATTCCAACAGAGTCAAGCTAATGTGTAGCTACGGTGGAAAAATTCAACCTAGGCTACACGATCATCACTTTACGTACATCGGCGGCGACACCAAAATCCTCACCGTTGATCGTTCCGTCAAATTAACCACACTCGTCGGTAAGCTCTCAACAATGGCGAATTGTGATGTTTGTTTCAAGTATCAACTCCCTGGTGAAGATCTCGATGCTCTGATCTCCGTTTGCAACGAGGAAGATCTCGATCACATGATGATCGAGTACGATCGGTTGGGTCGCGTTTCTCCTAAACCTGCTAGGTTGAGACTCTTCCTCTTCCCTGCACCTGTCATCAACAACAAGGACGACGAAGATGCGTCTGCTGATTCTTCTGTTTCCGCTGTTATTCTCGCTGCGGTGGAAGATTCCAAATCGGAAGGACAATGGTTCATCGACGCGCTCAATTCCGCTAATGTTCCGCCGTTGGAAGAATCTCCTCCGCCGCCTCCGACGTTGAATCCAGATTATCTCTTTGGTTTAGATAAACCGTATTCTGATACTCCGTCGGCGAAGCAAGCGGAATTTCCGGTAACTGTTCCGGATTTTCCGGCTATGGAAACTGAATGTGGGCCCGAAACGGTTAAAGAAACTGAGATTCAGGAACTTGAGAGAATGGAGTTTGTGAATATTGAACAAGAAGTGAAAGTTGACGGAGAAAACGGCGGAATTAACGGTGTTTTTGACTGTCACACTGAAGAAAACGCGGAAAAAGTGATTCCGTTAGTTGCGAATGAACCTGAACCTGTTCAGAGTCCGACTCAGACTCTGGATCAAATTCAAATCCAACCCGGTTCGTTTCAGGTTCAGATTCCTGAACCGGTACCGGTTCAGTCAATGTTTTCTCCTGTAAGGCATCATAACGTGTCTCTGTCTCCTGGTGGTTACTCAATGGGGTATACAAATGAACCGGCTCCGGTTTATCTGATTCAAACATCTTCAGGATTGTATCAAGCACTGAGGCCGGTAACTGGACCACACGGTCAACCGGTTTATTTTGCCTATACGCAAATTGTGAACCAGAACCAGTTTGGTTACAATGGTTCAGGGGTACCTGGTGTGGTTTCTGAGCATGGCTATTCCAATGGTGGTTCTTATGTGTCTGACAGATCAGCTTTGCCATTGTAG 1287 0.467 MEHQSLTSHPNSPDSSPNSRELLENNDHRSPFDEHPPQPPPSNSNRVKLMCSYGGKIQPRLHDHHFTYIGGDTKILTVDRSVKLTTLVGKLSTMANCDVCFKYQLPGEDLDALISVCNEEDLDHMMIEYDRLGRVSPKPARLRLFLFPAPVINNKDDEDASADSSVSAVILAAVEDSKSEGQWFIDALNSANVPPLEESPPPPPTLNPDYLFGLDKPYSDTPSAKQAEFPVTVPDFPAMETECGPETVKETEIQELERMEFVNIEQEVKVDGENGGINGVFDCHTEENAEKVIPLVANEPEPVQSPTQTLDQIQIQPGSFQVQIPEPVPVQSMFSPVRHHNVSLSPGGYSMGYTNEPAPVYLIQTSSGLYQALRPVTGPHGQPVYFAYTQIVNQNQFGYNGSGVPGVVSEHGYSNGGSYVSDRSALPL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2556 428 MobiDBLite consensus disorder prediction 1 46 - -
Tpr4g2556 428 Gene3D - 66 148 - -
Tpr4g2556 428 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 394 - -
Tpr4g2556 428 MobiDBLite consensus disorder prediction 1 20 - -
Tpr4g2556 428 SMART PB1_new 61 149 IPR000270 GO:0005515
Tpr4g2556 428 CDD PB1_UP2 50 147 - -
Tpr4g2556 428 PANTHER OS05G0427100 PROTEIN-RELATED 1 394 - -
Tpr4g2556 428 Pfam PB1 domain 66 148 IPR000270 GO:0005515
Tpr4g2556 428 SUPERFAMILY CAD & PB1 domains 63 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2556 Tpr-Chr4 27902073 27903778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2556 45 190 MAP Kinase Kinase Kinase AT5G57610 37.671 3.87e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2556 - - cam:101512371 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2556 4 27902073 27903778 Tpr4g2556 4 27902073 27903778 ECH