Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2540 ATGGCGGGCAAACGAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTGTTGAGGTTCCGCCTGATAAACCTCCATCTAGACCTGTTGCATATGAGATTGATACATCAGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCGTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAATGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATTTGGTTCCGCCTAAGAATATAATGTCCACCTTGAAAGATAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGTCGAGACCGGGTATTTTTTCAAACATAGGACGGTTGTTGCAGACGGATCCGAACACGTTCAAGACATTTTCTTTGCACATCCTAAATCTATAAGTTTGTTCAATTCTTTTCCTACTGTGCTTTTGATGGATTCGACATACAAAACAAACAAATACAAAATGCCGTTATTTGAGATTGTCGGATTCACATCAACTGGGAGATCTTTCAATGTTGGATTCGCTTGGCTTACCAATGAAAGAGAAGACAACTTCACTTGGGCTCTAGAGCAGTGTGTCAGTCTCTTAAGGAATGAGGATGTTAGACCGAAGGTGATTGTCACCGATAGGGATTTGGCTCTGATGAATGCAGTTTCCGAGGTATTTCCAACATCGGCTGCAATGGTTTGTCGTTTCCATGTAAAAAAGAACGTGAGCTCTAAGATGAAGGAAATTGTGAAAATCAAGAATGGAGAGAATGAGAAGCAGACTGATGTGTGGGATCAAATCACCGATGCTTTTAATGATGTGTTACAGTCGCCAACGGAAAAAGAATATGCTGACAATGTTATGGTGTTTAGGGAGCTCTGTGCGAGATGGCCAAAGTTTTTGCGTTATGTTGAAGAGACTGTCCTAGACACTGATAAAGAAAGGGTTGTCAATGCTTGGGTAGACCAACATATGCACATGGGGAATCACACCACGAATAGAGCTGAATCATGTCATGGTGTGTTGAAAGGTTACTTGAAGGACGGTAACGGTGACTTGGTGAAAGGATGGGAAGCGATAAATAAGATGTTGATAAGTCAGTTCACTGAAGTACAAGGTGAATTCGGTCGGAGTATGTCTGTTGCGGAACACAGATACGATGATGATCCTCTTTACGCATTCTTGTTTTATAAAATCTCAAGAAAGGCTATGGATCACATTTATGACGAAGCAAACAGGGTCGAAGAATGTGGTATGGATAGCAAAAAGTGTGGCTGTGTTATGAGAAGGACATACGGGTTGCCATGTGCATGCTTGATTGCGAAGAAGATAAAAAATAACAAACCTATCCGACTGGATGAGATTCACCCTCAATGGAAGAAACTGTGTTTCGAAGATGAGCCGGCACCGGGCGACGTGGCTGACGATTATGATTGCTTGGCTGAGTGGAAAGCAATTCAGGAACGATTAAAAACAGCCGATGTTAGCGTGAAGAATGATATTAGGAATCAACTTCGTCTCATTGCATATCCAGAAACCACCTCTGTGAAACCTCCGCTTCAAAAGGCCAAAACAAAAGGTGCTAGAAAGAAAAAATCAGTTCGTGTCACAAGATCCACGAGCAGGGATAAGTCTCGGTGGGAGCATGTTGATGATCATATTGCAGCTACACAGGCATCTCAGTCGCAACCAACAAAGTCAAAGCCGTCGACTTCACAAACAGTGCCTGAGGTGCCTAAAGAACTCGTCATCAGTACTTTGACTCCAGCACCTCCAGCACCTCATGAAATTCCTTTTATCAACCATATGCCGAAGTTCATGCACCCATTTATTGAAGATATTATTGACGTTCAAGGTGACGGTTATTGTGGATACCGTGTGGTAGCTTTGCACCAAAAAGGAAATCAACAAGATTATGAGTTGATCAGACTGAACATGGAGAGGGAGCTGAGATTGCATAAGGAATCATATGTGGAGTTGTTCGATACTGATCGTTACAAGTATGTCACGGATGCACTTTTCCCACCACCGAGAAGGAGTAAACATGCTATTGCAACCAAGGACAAATGGTTTACTTTTCCGGATATGGGTTACGTTGTGGCTACTCATTTTCAGAGGGTTGTTGTTCAACTATCAAATATGGAAAGGTGTGGAGCATCTAGAACTTGTTTCCCATTGCGTGGCAAACCTCCAGCAGACACGTCAGACTTGGATTCCAAGATTATTTGCATCGGCGCGCTCGCTGACCACTTTGTGTTAGTGCGATTGAAAGTAGGATGTCCGATACCTCCAACGGCTCATCAGTGGAAAAACTCTTGTTCCGAAGAAGCTGCAGAATGGGAGCCCATGTTTTTGGATAGAATGCAAAAGTTTGGTGAGCTGTTGACGATTGAAAGAGCAGGCGATGACTTGGTCACGATTGGAAAGGGTAGCAAAGACGATCCGTTGGAATTGTAG 2787 0.4345 MAGKRELVLGICAPGIVEVPPDKPPSRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAKQLYNLSHRLKLKMRASMTEMQHLSKRLVETGYFFKHRTVVADGSEHVQDIFFAHPKSISLFNSFPTVLLMDSTYKTNKYKMPLFEIVGFTSTGRSFNVGFAWLTNEREDNFTWALEQCVSLLRNEDVRPKVIVTDRDLALMNAVSEVFPTSAAMVCRFHVKKNVSSKMKEIVKIKNGENEKQTDVWDQITDAFNDVLQSPTEKEYADNVMVFRELCARWPKFLRYVEETVLDTDKERVVNAWVDQHMHMGNHTTNRAESCHGVLKGYLKDGNGDLVKGWEAINKMLISQFTEVQGEFGRSMSVAEHRYDDDPLYAFLFYKISRKAMDHIYDEANRVEECGMDSKKCGCVMRRTYGLPCACLIAKKIKNNKPIRLDEIHPQWKKLCFEDEPAPGDVADDYDCLAEWKAIQERLKTADVSVKNDIRNQLRLIAYPETTSVKPPLQKAKTKGARKKKSVRVTRSTSRDKSRWEHVDDHIAATQASQSQPTKSKPSTSQTVPEVPKELVISTLTPAPPAPHEIPFINHMPKFMHPFIEDIIDVQGDGYCGYRVVALHQKGNQQDYELIRLNMERELRLHKESYVELFDTDRYKYVTDALFPPPRRSKHAIATKDKWFTFPDMGYVVATHFQRVVVQLSNMERCGASRTCFPLRGKPPADTSDLDSKIICIGALADHFVLVRLKVGCPIPPTAHQWKNSCSEEAAEWEPMFLDRMQKFGELLTIERAGDDLVTIGKGSKDDPLEL* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2540 928 MobiDBLite consensus disorder prediction 665 687 - -
Tpr4g2540 928 MobiDBLite consensus disorder prediction 627 687 - -
Tpr4g2540 928 Pfam MULE transposase domain 255 351 IPR018289 -
Tpr4g2540 928 Pfam Transcription factor AFT 89 138 IPR014842 GO:0000981|GO:0036086
Tpr4g2540 928 MobiDBLite consensus disorder prediction 648 663 - -
Tpr4g2540 928 MobiDBLite consensus disorder prediction 633 647 - -
Tpr4g2540 928 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 555 IPR031052 GO:0006355
Tpr4g2540 928 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 72 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2540 Tpr-Chr4 27675551 27678972 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g2540 MULE 1.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2540 - - gmx:100800409 580.867