Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2535 ATGCCTCACAGAGCAACTTACTTTTTTCCTAGGCAATTTCCCGAGAAAAGATTGGATGAATCATCTTCAAAGAAGATATTAGATCACGAGAAGAAAAAATTTGTTGGAGTAGTCAAATCAACGGATACGACTTTTTGCGTTGAAAGCGACGCGCCGAAAACCTCTTCTGTTTCAGTTGTTGCTAATAAAGATGACGTCGTTTTCTCTTCAGTGAAAAACTCTGCTGTTTCCGATCTTCTTACCGGCGGCGATAAGTTTCGGAGTGAGCAGAAGCAAATTGCAGCGTTTTGTGATTGGTTAGTTGATAAACGACATAATCACCACCATCGCCGCCGTCATCATCATCAGCACCGGCACCGATCGGAGGATGAGGATCGCGAGGTTCTACTTCCGCATCCCGATGATGTGAAATCGGCGTCGCCGGAAAAAGATGCTGTTGATGTTGATCGGAGCTTTGATAGGGAGGTTTCGCTTCCGAGATTGTCGAGTGGAAGCAGTTACGCTACGAGTTTGTTTGCTTCGGATGTTACCGTTACTGCTACATTTTCAAGTGATGACATTACGAAAGAAGATACGTCGTCGTTTCTTGTTTCTACAAATGAAGTTACAAGAAGGAGTGAACAACAGAAACAGAAAGAAGAAGATGAAGAACATCATGAGGAAGAGAAACGCGATGGAGAGAACTATGCTAAGCAGTACAAAGAAAGCTATGAACTACAATTAGCTTCAGCGAAGAGGATTTCTTTTCTGTCAAGTCTTGGTTCTGAACCATTTCTCACTTTGGATACTGGATTAGAAACTTGGGATGTTGAATTGGTTTCTCGTCGTTTATGGGTGACAGGGTGTTTGTCGTACACTGACAAGATTTCGGACGGATTTTATAACATATTGGGAATGAATCCGTATTTGTGGGTGATGTGCAATGATATGGAGGAAGAAGGGAATTTCCTTCCTACATTGATGGCGCTTAAAGCAGTTGAACCCAATGAGAGTTCATTGGAAGTGATTCTTATTGATAGACATGAGGATTCTCGTCTTAAGGTGCTTCAAGATAAAGCTCGAGAACTATATTCTGCTTCTGAGAATGCCTTGGTGCTCGTTGAGAAGCTCGGAAAACTTGTTGCTATATTTATGGGGGGCACCTTCCCTGTGGAGCAAGGGGATATGCAAAAGAGGTGGGAGATGGTTAGTAAGCGGTTGAGGAATTTTCATCAGTGTGTTGTGCTTCCCATTGGTAGTTTGTCCACGGGACTCTGTAGGCATCGTGCGATTCTCTTCAAGAGATTGGCAGATTATATAGGCTTGCCATGCCGCATAGCTCGAGGTTGCAGGTACTGTGCTTCGGATCATCAATCATCTATTCTTGTGAAGATTAAAGATGACAGGCAACTGTCAAGGGAGTATGTTGTTGACCTGGTTGGGGAACCAGGAAATATTTTTGGGCCAGATTCATCAATTAATGGAGCATATGTGTCTTCCATACCTTCCCCATTTCAAATTTCTCATTTGAGAGATTCTCAATCGCCCTATGTGGATGATGCAGCATCTCCTCAAGTGATATGTTTTAATCAGAATTCTCCCAACAATCACCTGTATTCAGGCCATCTACAGGAAGATCAACAACATAAAGAAACTGATTTGTACAAAAATAATAATAATGTCTTCAATTATGCTTCAGTTGATCAAACTTGTGGAGGTGTTTCTCAAGCTCTTCGCCCAGCCTCTGAAGCATTATTACATGAAATTCCATTTGTTGGTAAAGATCCAGTTGTAGTCAAAGAAATTTCTTACAATGAGATCATTGCAAATGGAAGTTCGGTGGTAAATGGTATCCAGTCAAAGCTGGAACAGGTAGACAATAGGCTTGAAAACCAGGGTGCTGGGGATATTCCAAAATATGTGAATCTTGAACCATCACTAGCAATGGACTGGCTTGAAATATCATGGGATGAGTTACGGATCAAAGAGCGCATTGGTGCTGGATCATTTGGGACAGTGTATCGTGCTGAATGGCATGGATCAGATGTTGCTGTCAAAGTTTTATCGGTTCAGAATTTCCATGATGATCAGTTGAAAGAGTTTTTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCGGTTACAAAACGGCCCCATCTATCTATAGTGACAGAGTATTTGCCTAGAGGTAGTTTATTCCGCCTGATACATAGGCCAGCAACTAGTGAAATTAAGGATCCAAGGAGAAGATTACGAATGGCTATAGACGTGGCTAAAGGGATCAATTATCTTCACTGTCTGAAGCCTCCAATCGTGCACTGGGATCTCAAATCCCCGAACCTGTTGGTAGACAAAAATTGGAATGTAAAGGTGTGTGATTTTGGGTTGTCCAGATTTAAAGCAAACACTTTCTTGTCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCCGAATTTCTTCGTGGAGAACCTACAAATGAGAAGTCTGATGTTTACAGTTTCGGAGTTATCCTGTGGGAACTCGTGACCTTACAACAACCTTGGAATGGACTTAGCCATGCCCAGGTGGTTGGAGCAGTGGCATTCCAGAATAGGAGACCTTCTATCCCTCCAAACGTCTCCCCAGTATTGGCCTCCCTTATGGAATCTTGTTGGGCTGATGACCCTGCTGATCGCCCATCTTTTGCTAGCATAGTTGAGACGCTAAAGAAGTTGCTAAAGTCACCAGCGGATGCGATAAAAATGGGTGGAACATAA 2769 0.428 MPHRATYFFPRQFPEKRLDESSSKKILDHEKKKFVGVVKSTDTTFCVESDAPKTSSVSVVANKDDVVFSSVKNSAVSDLLTGGDKFRSEQKQIAAFCDWLVDKRHNHHHRRRHHHQHRHRSEDEDREVLLPHPDDVKSASPEKDAVDVDRSFDREVSLPRLSSGSSYATSLFASDVTVTATFSSDDITKEDTSSFLVSTNEVTRRSEQQKQKEEDEEHHEEEKRDGENYAKQYKESYELQLASAKRISFLSSLGSEPFLTLDTGLETWDVELVSRRLWVTGCLSYTDKISDGFYNILGMNPYLWVMCNDMEEEGNFLPTLMALKAVEPNESSLEVILIDRHEDSRLKVLQDKARELYSASENALVLVEKLGKLVAIFMGGTFPVEQGDMQKRWEMVSKRLRNFHQCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHQSSILVKIKDDRQLSREYVVDLVGEPGNIFGPDSSINGAYVSSIPSPFQISHLRDSQSPYVDDAASPQVICFNQNSPNNHLYSGHLQEDQQHKETDLYKNNNNVFNYASVDQTCGGVSQALRPASEALLHEIPFVGKDPVVVKEISYNEIIANGSSVVNGIQSKLEQVDNRLENQGAGDIPKYVNLEPSLAMDWLEISWDELRIKERIGAGSFGTVYRAEWHGSDVAVKVLSVQNFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPATSEIKDPRRRLRMAIDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWNVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPTNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRPSIPPNVSPVLASLMESCWADDPADRPSFASIVETLKKLLKSPADAIKMGGT* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2535 922 Gene3D Phosphorylase Kinase; domain 1 645 729 - -
Tpr4g2535 922 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 131 920 - -
Tpr4g2535 922 MobiDBLite consensus disorder prediction 205 229 - -
Tpr4g2535 922 ProSiteProfiles Protein kinase domain profile. 652 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2535 922 MobiDBLite consensus disorder prediction 108 151 - -
Tpr4g2535 922 MobiDBLite consensus disorder prediction 118 151 - -
Tpr4g2535 922 SUPERFAMILY Protein kinase-like (PK-like) 633 906 IPR011009 -
Tpr4g2535 922 Coils Coil 205 225 - -
Tpr4g2535 922 Pfam Ethylene-responsive protein kinase Le-CTR1 271 479 - -
Tpr4g2535 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Tpr4g2535 922 MobiDBLite consensus disorder prediction 198 229 - -
Tpr4g2535 922 ProSitePatterns Protein kinases ATP-binding region signature. 658 679 IPR017441 GO:0005524
Tpr4g2535 922 Pfam Protein tyrosine and serine/threonine kinase 652 906 IPR001245 GO:0004672|GO:0006468
Tpr4g2535 922 Gene3D Transferase(Phosphotransferase) domain 1 731 918 - -
Tpr4g2535 922 SMART serkin_6 652 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2535 922 CDD STKc_MAP3K-like 658 906 - -
Tpr4g2535 922 PRINTS Tyrosine kinase catalytic domain signature 726 739 IPR001245 GO:0004672|GO:0006468
Tpr4g2535 922 PRINTS Tyrosine kinase catalytic domain signature 767 785 IPR001245 GO:0004672|GO:0006468
Tpr4g2535 922 PRINTS Tyrosine kinase catalytic domain signature 833 855 IPR001245 GO:0004672|GO:0006468
Tpr4g2535 922 PRINTS Tyrosine kinase catalytic domain signature 877 899 IPR001245 GO:0004672|GO:0006468
Tpr4g2535 922 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 131 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2535 Tpr-Chr4 27549499 27558720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2535 1 921 MAP Kinase Kinase Kinase AT4G24480 56.082 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr4g2535 PK_Tyr_Ser-Thr 2.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2535 - - gmx:100786546 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2535 4 27549499 27558720 Tpr4g2535 4 27549499 27558720 ECH
Tpr4g2535 4 27549499 27558720 Tpr3g3375 3 37263432 37270941 PCT