Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2532 ATGAACGAACAACAAAACAAGATAAGCTTCTTCACTGCAACCAACTCAGGTTTTCTAGTTGACCCTGCAATGTGTGGTGTGCTGAATATCCAAGACAAGCAAAGACTTGTCCATGAGGTTGCTCGTCAATCCAAAGATGCCCCAAATATACTTCAAGCATTTACTCGCCGGGAACTCCTAGAATTAATCTGTGCTGAATTAGGCAAAGAAAGGAAGTACACGGGATATACTAAGGATCAGATGATAGAATATCTTCTGAAGTTAGTTTCTAAGAAATCCAACCTGCACGTTGAACAAAATGCTCTTGCTCATTCTCCTGCCAAAAGTTCCATAGGATCTAAACGGAAAAAGGGACCTCCGTCTTCTGATTTACATAATGTTCAATTACAGAACACTAATGAGGATACAATGAAGACCTTAGTGTGTCAGAATGTTGCATGCAAAGCTACGCTGAATCCAGAACATTCGTTTTGTAAGAGATGTTCTTGTTGTATATGTCGTTGTTACGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCACCTCTGATAATCCCAATGAAGGGTCATGTGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAATGTCTTGCATTTTGAAGGGAAGTTGCGGTAAAACCTTGGACGGAAGCTTCTATTGTGTTTCTTGTCGAAAAATTAATGACTTAATGACGACGTGGAGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAGTTGACATACTCTCTTTGCGAATATCCTTGGCCCACAGAATTCTCATAGGAACAAAAGTCTACAAGGAAGTGCAGAAGATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGACCTCTGGATCATGTATATGCTAGGATGACGCGTGGAATTGTTAGCAGACTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGTTCTACTGCAATTGAATGTTTTGATTTGAAGTTTTCTGAACACTTTTCTAGTTCTGCAGAAAAGAAAGAAGCACCAACATGCTCTTTACATTTTGAAGAGTGTCTTCCTACCTCAGTGGTCATTGTGCTTGAATACAAAGACAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACGGAAAATCAACAACGGACTATCCAGAACAACCCACTTTCATTGTTTTGAGGCCCGAGAAAAGATTCAAGTTAGAAAACCTCACACCTTCAACCGAGTACTCTTGCAAAGCTTCTATTTTCAGCAGCACAGGGATTTTGGGTGCAGCAGAAGCTAAATGGGTGACGCCTTGTCAACCACCTTCAAAAATTATTCGACATATTGCAACCCATTCATCTTTTAACACATGTACGCAAAACCATTCAACTATCAGGGAAAGGTTTGAAGAGTTCCTCACCAAGTCCCCAACGATAGAACCTTTTTCATATAAAAGTTTTGCAGCAGCTCCACCTGCCACACCTTCTAAATCCAATGAAATGAGACAACTTACTGGTTTGAATTCTAGAAAGCGCGTGAAAGAAAATGATTACGAGTATTCTGTGAGGGTAGTCAAATGGTTAGAGCATCAAGGGCACATAGACGAAATCTTCAGAGTGAAGTTTCTAACATGGTTCAGTCTCAAGGCTAATCAGCAAGAGAGAAGGGTGGTTAGTGCTTTTATCGATGCATTGATTGATGACCCTGCAAGCTTAGCAGACCAGCTAATACACACTTTCACCGACGAAATTTGTTGCGACCAAAAATCTTAG 1752 0.4053 MNEQQNKISFFTATNSGFLVDPAMCGVLNIQDKQRLVHEVARQSKDAPNILQAFTRRELLELICAELGKERKYTGYTKDQMIEYLLKLVSKKSNLHVEQNALAHSPAKSSIGSKRKKGPPSSDLHNVQLQNTNEDTMKTLVCQNVACKATLNPEHSFCKRCSCCICRCYDDNKDPSLWLTCTSDNPNEGSCGMSCHLQCALSNQMSCILKGSCGKTLDGSFYCVSCRKINDLMTTWRKQLLVAKEARRVDILSLRISLAHRILIGTKVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAIECFDLKFSEHFSSSAEKKEAPTCSLHFEECLPTSVVIVLEYKDKLLKNFLGCRLWHGKSTTDYPEQPTFIVLRPEKRFKLENLTPSTEYSCKASIFSSTGILGAAEAKWVTPCQPPSKIIRHIATHSSFNTCTQNHSTIRERFEEFLTKSPTIEPFSYKSFAAAPPATPSKSNEMRQLTGLNSRKRVKENDYEYSVRVVKWLEHQGHIDEIFRVKFLTWFSLKANQQERRVVSAFIDALIDDPASLADQLIHTFTDEICCDQKS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2532 583 PANTHER OS08G0220600 PROTEIN 11 583 - -
Tpr4g2532 583 PANTHER VIN3-LIKE PROTEIN 2-RELATED 11 583 IPR044514 GO:0010048|GO:0040029
Tpr4g2532 583 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Tpr4g2532 583 MobiDBLite consensus disorder prediction 103 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2532 Tpr-Chr4 27479713 27485076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2532 17 430 PHD Gene Family AT4G30200 38.462 9.46e-82 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2532 - - gmx:100785502 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2532 4 27479713 27485076 Tpr4g2532 4 27479713 27485076 ECH