Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2497 ATGATGTGGGAATGGGGAGATGAACAACAACAACAACAACAACAACAATTTCACGACAACAACACTTCCCAGAAACCCGACCAAATCCCCGACCCAAATTTCTATCTCAATTTCGATTTCTTCTCCGCTCTCTCCAAACCCAAGGATTATTACAAGATATTGGAAGTGGATTATGATGCAACCGATGATACTATTCGCTCTAATTACATTCGTCTTGCTTTGAAATGGCACCCGGATAAACAGAAAGACCACGATTCTGCCACGTCACGATTTCAAGATATAAACGAGGCTTATCAGGTTTTGAGTGATCCAGACAAAAGGAGGGAGTACGACATAAACGGGATGCGTTACATATATGATTACAATATCATTGATTATCTTAACCGTTACAAGGGCCTTATATTAACTTGCAATGGCCTTGGCTTAAAGCATTCGATATGGTAA 444 0.4009 MMWEWGDEQQQQQQQQFHDNNTSQKPDQIPDPNFYLNFDFFSALSKPKDYYKILEVDYDATDDTIRSNYIRLALKWHPDKQKDHDSATSRFQDINEAYQVLSDPDKRREYDINGMRYIYDYNIIDYLNRYKGLILTCNGLGLKHSIW* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2497 147 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 15 147 - -
Tpr4g2497 147 PRINTS DnaJ domain signature 51 69 IPR001623 -
Tpr4g2497 147 PRINTS DnaJ domain signature 69 84 IPR001623 -
Tpr4g2497 147 PRINTS DnaJ domain signature 86 106 IPR001623 -
Tpr4g2497 147 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 15 147 - -
Tpr4g2497 147 MobiDBLite consensus disorder prediction 1 26 - -
Tpr4g2497 147 SUPERFAMILY Chaperone J-domain 45 133 IPR036869 -
Tpr4g2497 147 Gene3D DnaJ domain 41 125 IPR036869 -
Tpr4g2497 147 CDD DnaJ 49 103 IPR001623 -
Tpr4g2497 147 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Tpr4g2497 147 ProSiteProfiles dnaJ domain profile. 49 114 IPR001623 -
Tpr4g2497 147 Pfam DnaJ domain 49 111 IPR001623 -
Tpr4g2497 147 SMART dnaj_3 48 106 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2497 Tpr-Chr4 26995475 26998625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2497 42 111 C2H2 Transcription Factor Family AT1G74250 41.333 3.43e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2497 - - gmx:100804409 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2497 4 26995475 26998625 Tpr4g2497 4 26995475 26998625 ECH