Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2495 ATGAGAGAAAATTGTGGAACCTGGACACCCCAGGTTCAATTTAATTTGCAATCACCCAATTTGAGTTCTTTTTGTGCTCGCTTTGATATGGGGAAGCAAAATGCTGTTGCATCTGCAGCGATGAACCCGGGTGTCAATATAAATACGATTTCAAGGAATGAGGCAGTACCAACTTATGAATCCTCTGCACTACCTCATATGCAGTTGGGAAACTCTAATGAACCTCATGGTTGGTTTTATTGTTTGCCTCGATTTCGACAAGGTTTTACGTGTCCTCCAAACTTCACTTCTGAGGAAAAACTTCCTCCTCCTAGTCATTTGAAGGGTTTTAAGGAGGAAATTGCACCCAATGGGGAATTAGGATATCCTCAGAAGCAGTTCCTCGTCATTGATCAAACGGGTGATCAAACAACTCTCATTTATAGTTCAAGATTTGGGAGCCCTGTTGAGTGCCTCGGTTCCTGGGATTCAAAATTGCATGGTTGTAACAATTTTAATGGGAATAATGAACCTTCTTTAAGAAGAGACGTGAATCATGTGGTTGGACATGGATTTGGACCGACTTTTGATTATAAAGTTGATGAAAATGATAATCAAGGAACTGAGATTGAAAGCGAGATGCACGAAGACACAGAGGAGATCAATGCATTGCTTTACTCAGACAGCAATGCCGATGGTTATACTACCGAGGATGATGAAGTTACCAGCACTGGGCATTCACCCAGTACAATGACCACTCATGATAACCAGGAACCTTTCCGAATTGGAGGAATCGCCGAAGTAGTTGCTAGCTCCTCCCCTGGAAAAACAAAGAAACGTAAGCTATTCAATGTGGCTTATGATCATGATGATGTGCAGTTTATAGACACTGCAAATTCTCTAAAACAAAAGCGACACTTCGACCCCATGGGATATGATGACGATGCAGAATCCAGATGCTCTGGTAGCAATTGCGGTCGAAGGTCATGTGAAATGGGTTCCTTAACAGGCACTAAGAAGATGAGAAAGGAAAAGATTCATGATGTTCTAAGCATTTTGCAGTGCATAGTTCCTAATGGGAAGGACAAGGAACCAGTCCAGCTTCTTGATGAAGCCATACATTGCTTGAAATCTTTGAAACTCAAGGCTAGAGCTCTTGGTCTCAATGCCATAATAAAAGCAGCTATGTTCAAATTTAATCAGAGGAAGCATTCTGCAATTTTTATTTGCATTGTGGTGTATGAAATCCAAATATTAGAGCCTGAAACTGTGAATTCTACAAACACCCTTTTGAGATCTTCCTCAGCTGTTTTTTTTTTATGCAACTTGTGTGTTAAGTGTGAAGAAAGAGGGAAAAGCATACTCACTATAGTCATTACTACTACTCAACAAATTATGGCACAGTAA 1386 0.4055 MRENCGTWTPQVQFNLQSPNLSSFCARFDMGKQNAVASAAMNPGVNINTISRNEAVPTYESSALPHMQLGNSNEPHGWFYCLPRFRQGFTCPPNFTSEEKLPPPSHLKGFKEEIAPNGELGYPQKQFLVIDQTGDQTTLIYSSRFGSPVECLGSWDSKLHGCNNFNGNNEPSLRRDVNHVVGHGFGPTFDYKVDENDNQGTEIESEMHEDTEEINALLYSDSNADGYTTEDDEVTSTGHSPSTMTTHDNQEPFRIGGIAEVVASSSPGKTKKRKLFNVAYDHDDVQFIDTANSLKQKRHFDPMGYDDDAESRCSGSNCGRRSCEMGSLTGTKKMRKEKIHDVLSILQCIVPNGKDKEPVQLLDEAIHCLKSLKLKARALGLNAIIKAAMFKFNQRKHSAIFICIVVYEIQILEPETVNSTNTLLRSSSAVFFLCNLCVKCEERGKSILTIVITTTQQIMAQ* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2495 461 PANTHER TRANSCRIPTION FACTOR BHLH145 1 382 IPR037546 -
Tpr4g2495 461 PANTHER TRANSCRIPTION FACTOR BHLH145 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2495 Tpr-Chr4 26891512 26895190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2495 77 377 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.565 2.75e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2495 - - mtr:MTR_5g065670 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2495 4 26891512 26895190 Tpr4g2495 4 26891512 26895190 ECH