Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2483 ATGGATCAATTCTATCATGAAGTGGCTTGCGCAGCATGTTCACGACTGAGGAGGCGTTGCATTAATGCTTGCATTATGCGTCCATACTTCCCACCTGGGGATGATTTGAACTTTATCAACGTGCATTTCACGTTTACCAACAATAATGTGGAGAGATGGATAACACTGAGGGAGACTGAAGAGCAGAAACGGGACCTGGTAAGGGCACTGAAATGGGAAGCTGGCCAGCGCCTCTTCAACCCAATCGAAGGAAGTTACGCGGTGTGCATGAGGCAGCGCCAGCGAATTACAGAATTGAATGCTCAGGTGCAATTTCTGTTGATGATGGTTGACCATTTTAACCAGCAACAATAG 354 0.4689 MDQFYHEVACAACSRLRRRCINACIMRPYFPPGDDLNFINVHFTFTNNNVERWITLRETEEQKRDLVRALKWEAGQRLFNPIEGSYAVCMRQRQRITELNAQVQFLLMMVDHFNQQQ* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2483 117 Pfam Lateral organ boundaries (LOB) domain 9 104 IPR004883 -
Tpr4g2483 117 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Tpr4g2483 117 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 110 - -
Tpr4g2483 117 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 110 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2483 10 103 AS2 family AT2G28500 36.170 1.54e-18 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr4g2483 LOB 1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2483 - - csv:101204854 76.2553