Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2481 AAAGGAAGACAAGGAGAACGCACTAGGCTTTATGTCAGGGGTAATGTTCTTGGATACAAGAGGTCCAAGTCAAATCAATACCCAAACACCTCTCTTGTCCAGATAGAGGGAGTAAACACCAAGGAAGAGGTTGCTTGGTATGCTGGGAAGCGTGTGGCGTACGTTTACAAGGCCAAGGTAAAGAAGGACGATAGCCACTATCGATGCATTTGGGGAAAGGTTACTAGGCCTCATGGTAACAGTGGAATACTCCGTCCAAAGTTCACATCAAATCTGCCACCAAAAGCAATGGGAGCCAGGGTTAGAGTATTTATGTATCCAAGATGTTTTGAACCCGTGACTAGAAGGCAGATACATTATGGAAGTTAA 369 0.4472 KGRQGERTRLYVRGNVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYAGKRVAYVYKAKVKKDDSHYRCIWGKVTRPHGNSGILRPKFTSNLPPKAMGARVRVFMYPRCFEPVTRRQIHYGS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2481 122 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 108 IPR001780 GO:0003735|GO:0005840|GO:0006412
Tpr4g2481 122 Gene3D translation elongation factor selb, chain A, domain 4 1 109 IPR038661 -
Tpr4g2481 122 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 12 104 IPR001780 GO:0003735|GO:0005840|GO:0006412
Tpr4g2481 122 Pfam Ribosomal protein L35Ae 10 104 IPR001780 GO:0003735|GO:0005840|GO:0006412
Tpr4g2481 122 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 108 - -
Tpr4g2481 122 SUPERFAMILY Translation proteins 10 104 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2481 Tpr-Chr4 26545042 26547313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2481 1 107 Cytoplasmic Ribosomal Protein Gene Family AT3G55750 86.916 6.85e-68 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2481 K02917 - pop:7494468 190.274