Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2464 ATGTCTGACGCTTTGATCAATGGATTGGCTGGAGCTGGTGGAGGGATCATTGCTCAACTTATCACATACCCTCTTCAAACTGTAAACACTCGTCAACAAACCAATCGTGATCCGAAGGGCAAGAAGAATTTAGGGACTTTCCAGCAAATGTGTCAGGTTGTGAAACATGAGGGGTGGGAGCGATTGTATGGAGGCTTGACACCATCACTTGTCGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACCGAGCTGAAGCAGCAGCACTAGAGAAGAAAATGCTAGGCACCGGTGATGGTTCAGTTGGAATGCTTTCCTCACTTGTTGTTGCTGCGTTATCTGGCTGCGTTAACGTGCTCTTGACAAATCCCATATGGCTAGTTGTTACTCGCATGCAGACACATAGAAAAGAGTCGAAGAGAGCCCTCACTGATCCACGGTTGTCAGATGCCATTAAACAATCAACACTTTCTACTATTGAGCCTCGTGCTTATGGAACTAGTCATGTGATTCAAGAAGTTTATGATGAAGCTGGTGTTTTAGGTTTCTGGAAGGGCGTGTTACCAACATTAGTCATGGTTAGCAATCCTTCCATACAGTTCATGCTGTATGAAACCTTGTTGGCGAAGTTGAAAAGAGGACGTGCTAGTAATAGCGTAACTGCAATAGAGATATTTCTTCTCGGAGCTATCGCTAAGCTTGGAGCTACGGTGGTGACCTATCCTCTTCTTGTTGTCAAGGCAAGGCTTCAAGCTAGGCAGGTTAACAATGGAGACAAGAGACACCATTATAAAGGTACATGGGATGCTATTATTAAGATGATCCAGTATGAAGGTTTTAATGGATTTTACAAAGGCATGGGAACCAAAATTGTACAAAGTGTTCTAGCTGCAGCTGTTTTGTTTATGGTGAAAGAAGAACTAGTTAATCAGACTCGTTTCTTGCTTTCCAAGCCAAAGCTTGTGTGA 987 0.4306 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTNRDPKGKKNLGTFQQMCQVVKHEGWERLYGGLTPSLVGTATSQGVYYYFYQIFRNRAEAAALEKKMLGTGDGSVGMLSSLVVAALSGCVNVLLTNPIWLVVTRMQTHRKESKRALTDPRLSDAIKQSTLSTIEPRAYGTSHVIQEVYDEAGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKRGRASNSVTAIEIFLLGAIAKLGATVVTYPLLVVKARLQARQVNNGDKRHHYKGTWDAIIKMIQYEGFNGFYKGMGTKIVQSVLAAAVLFMVKEELVNQTRFLLSKPKLV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2464 328 SUPERFAMILY Mitochondrial carrier 3 313 IPR023395 -
Tpr4g2464 328 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 324 IPR044712 GO:0006862|GO:0055085
Tpr4g2464 328 Gene3D Mitochondrial carrier domain 5 320 IPR023395 -
Tpr4g2464 328 Pfam Mitochondrial carrier protein 108 218 IPR018108 -
Tpr4g2464 328 Pfam Mitochondrial carrier protein 7 89 IPR018108 -
Tpr4g2464 328 Pfam Mitochondrial carrier protein 226 314 IPR018108 -
Tpr4g2464 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 216 IPR018108 -
Tpr4g2464 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 90 IPR018108 -
Tpr4g2464 328 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 324 - -
Tpr4g2464 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 317 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2464 Tpr-Chr4 26351534 26356024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2464 24 323 Chloroplast and Mitochondria Gene Families AT2G47490 30.421 1.64e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2464 K13354 - gmx:100775784 499.59