Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2463 ATGCCTTCTTCTTCTCCTACCTTGTTCTCAAAATGTACTATAATCCCTGACCAAAAATCCACTATTGGAAACCTTAAACTCTCTGTTTCAGATCTTCCTATGCTTTCTTGTCACTACATCCAAAAAGGTTGTCTCTTCACAAAACCATCAATTCCCTTTCATAATCTAATTGCTATAATCAAAACTGCTCTATCTAGAACTCTCTCAATCTTTCCACCTCTCGCCGGTCGTTTAACCACTGACTCGGACGGTTATGTTTACATAACCTGCAACGACGCTGGCGTCGATTTTATCACTGCCATTGCCACTGAACTCTACATCCATGATCTTTTATCGACCATGGATGTCAATGAGTCTTTCAAAGAATTTTTTACTTTTGATCGGAAAGTCAGTTACAGCGGTCATTATTCTCCAATAATGGCCGTTCAAGTAACTGAACTTTCCGACGGTATTTTTATCGGCTGTGCCGTTAATCATGCTGTCACCGACGGTACTTCCTTCTGGAATTTCTTCAATACATTTGCACAATTATGCAGAGGAGCAAACAAATGTATCAGAAATTCTCCAAGCTTCCGTCGCGACTCTGTTTTAATCTCAAACGCTGTTCTCCGGTTACCGGAGGGAGGTCCGGTAGTGACATTCAACGCCGACGCTCCAATTCGAGAAAGAATATTTAGCTTCAGCAGAGAAGCAATTCAGAAACTCAAAGCCAGAGCTAATAACCGACGCTGGACGGAAAATAACAACGCCGTTGAATTGATGCAGAAACACATGAACGATCACTATAACAATAACAACAACAATAAAGAAAACGGTAACGGTAAGGTAGCGGCGTTAATTGAAAATTGGTTTAAAACCAATGTTAATTCAAAACAACAAACGGTTACCGTAACAGAAACAGAAACGGTTGAGATTTCATCTTTTCAATCTCTATGCGCGTTACTATGGCGTGCAGTCACGCGCGCGAGGAAATTTCATCCATCCAAAACAACTACTTTTAGAATGGCGGTTAATTGTAGACACCGTGTTAAACCGGAGCTAGAATCATTTTATTTCGGAAATGCTATCCAGAGCGTTCCAACTTACGCTTCCGCCGGAGACGTAATGTCGAAAGACATACGGTGGTGTGCGGAGCAGCTGAATAAAAACGTGAAGGCGCATGATAATGGTATGGTGAGGAAGTTTGTAGAGGATTGGGAGAACAATCCAAGGTGTTTTCCATTGGGGAATCCTGATGGTGGTTCTATAACAATGGGTAGTTCTCCGAGGTTTCCAATGTACGATAATGATTTTGGTTGGGGAAAACCGTTAGCAGTTAGGAGTGGGAAAGCGAATAAATTTGACGGTAAGATTTCGGCGTTTCCGGGGAGAGATGGAAGTGGGACCGTTGATTTAGAGGTTGTTTTGGCGCCAGAAACTATGGCGGGGCTTGAGAATGATGCTGAGTTTATGGTTTATGCTACTAGGCAGTTATGA 1476 0.4221 MPSSSPTLFSKCTIIPDQKSTIGNLKLSVSDLPMLSCHYIQKGCLFTKPSIPFHNLIAIIKTALSRTLSIFPPLAGRLTTDSDGYVYITCNDAGVDFITAIATELYIHDLLSTMDVNESFKEFFTFDRKVSYSGHYSPIMAVQVTELSDGIFIGCAVNHAVTDGTSFWNFFNTFAQLCRGANKCIRNSPSFRRDSVLISNAVLRLPEGGPVVTFNADAPIRERIFSFSREAIQKLKARANNRRWTENNNAVELMQKHMNDHYNNNNNNKENGNGKVAALIENWFKTNVNSKQQTVTVTETETVEISSFQSLCALLWRAVTRARKFHPSKTTTFRMAVNCRHRVKPELESFYFGNAIQSVPTYASAGDVMSKDIRWCAEQLNKNVKAHDNGMVRKFVEDWENNPRCFPLGNPDGGSITMGSSPRFPMYDNDFGWGKPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLENDAEFMVYATRQL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2463 491 SUPERFAMILY CoA-dependent acyltransferases 37 180 - -
Tpr4g2463 491 Gene3D - 7 204 IPR023213 -
Tpr4g2463 491 Pfam Transferase family 7 484 - -
Tpr4g2463 491 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 486 - -
Tpr4g2463 491 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 6 486 - -
Tpr4g2463 491 Gene3D - 219 483 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2463 Tpr-Chr4 26331204 26333051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2463 59 479 Monolignol Biosynthesis Gene Families AT5G48930 25.799 3.82e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2463 - - gmx:100500612 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0017 3 170425 172043 Tpr4g2463 4 26331204 26333051 PCT
Tpr4g2463 4 26331204 26333051 Tpr3g0016 3 162860 164517 PCT