Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g2392 | ATGAGGACATATATCATGTTTCTTCTCTATTTTGCTACGTTGTCAACAACAGTTGCTCTTGCTTTGAGTTTGAGTTCAGTGACTGACAAACATGCTTTGCTTTCTTTGAAAGTAAAGCTTACTAATGGTGAACCTGATTATCTTCCATCATGGAATGAATCTCTTCATTTTTGTGAATGGGAGGGTGTTACATGTGGTCGACGCCACATGAGAGTCTTTGTCTTGCAGTTGGAAAATCAAAATTTGGGCGGTACTCTTGAACCGGCCTTGGGAAATTTAACATTTCTCAAAAAACTCAAACTTTCCAACATCAATTTGCATGGTGAAATTCCAAGAGAAGTTGGTCGTTTGAAAAGGTTGCAAGTTCTTGACTTGAGCAAGAACAAGTTTCATGGTAAGATTCCTATTGAGCTAAGCAATTGTACCAATATTAAGGAAATTATCTTGTTGTACAATCAGCTCACTGGACATATTCCATCATGGTTTGGTTCTATGATGCAGCTTAATAAGTTGCTTCTTGGAGCAAATAATTTAGTGGGTACTATTCCACCTTCTCTAGGAAATATTTCATCACTCCAAAACATAACAGTTGCAAGAAATCAATTGGAAGGAAGCATACCTCGTGTCTTGGGTAAGTTGTCAAATTTGAAAGAGCTAAATTTGGGTTCAAATAACTTTTCTGGAGAAATTCCTTATTCTCTTTACAATCTGTCAAATATTCAAGTTTTTGTCCTTGGAGAAAACCAGTTTTTCGGTTATCTTCCATCAAATATACATGTTGCTTTCCCCAGCCTTCGAGCCTTCTTGGTCGGAGGGAACCACTTTGTCGGAACTTTTCCATGTTCAATATCCAACCTCACTAAATTGCGATGGTTTGATATATCATGGAATGGTTTTAATGGGCTAATACCTCCAACTTTGGGATCCTTAAGCAAACTTCACAGGTTTCACATTGGAAATAATAATTTTGGGAATGGAGGAGCTCCCGATTTGGATTTCCTTTACTCGCTAACCAATTGTACAGTATTGCAAGAACTAATGTTGGATGACAATAGATTTGGTGGCGTATTGCAAGAGCGTATAGGCAATTTTTCCAACCATCTCACTTGGCTTAGTATGGCAAGTAACCAAATATCTGGAAGAATACCAGAAGGAATTGGACAACTGATAGGTCTAACAGGTTTTAACATGAAGAAAAATTTCCTTGAGGGAACAATTCCATATTCTATTGGAATGTTGAAGAATATAGTAATATTGGTCTTACAAGAAAACAATTTATTTGGTAACATCCCTATTGTAATTGGCAATCTTACTGTGTTGTCTGAGCTTTACTTGCATACCAATGAATTAGAAGGAAGCATTCCATTTACTCTTAGATATTGCACAAAGTTGCAATCATTTGGTGCTTCTGACAACAACTTGAGTGGCAATATACCTAATCAAACATTTGCCTATCTAAAAGATTTAATAAATCTTGACTTGTCCAATAACTCGTTAACCGGTCTCATTCCTTCAGATTTTGGTAACTTGAAGCAACTTTCCATATTGTATCTGTATGCAAATAAGTTGTCAGGTGAAATTCCTGATGCACTTGCTGCTTGTTTGACACTAACAGAGCTTGTGTTGCAGAGAAACTTTTTTCATGGAAGTATACCTTCCTTTTTGGGCTCCTCATTAAGATCCCTCCAAATCCTAGACCTTTCTAGCAATAACTTCTCAAGCATAATCCCTCGTGAACTAAAAGATTTGACATCATTGAGTATATTGAACTTGTCTTTTAACAATCTCTATGGTGAAGTTCCTGTTGGAGGGATTTTTAATAACATCACAACAATTTCACTCGTTGGAAATAAAGATCTTTGTGGGGGAATACCTCAACTGAAACTCACTGCATGCTCAAGATCACCTTCAAAGAGACACAAAGGGTCTTTTAAAGTTATCTTCATCATTATAATTGGCGGGGTTTTAATCTCTTTTATAGTGTTTATCACTATATGTTATCTAAGGAAAAAGACAAGAAAGTTACTTTCTTCCCCATCTCTGCAAAATAGCCACTTGGGGATTTCTTATCGAGAGCTACATGAAGCAACCAACGGATTTTCTTCATCAAATTTGATAGGCACGGGAAACTTTGGTTCTGTATACAAAGGATCCCTTATCCAGTTTGAAGGACCTATTGCGGTAAAGGTGTTGAAACTTGAAACACATGGGGCATCTAAGAGTTTTTTGGCTGAATGTAAAGTTCTTGAAAAGGTTAAACATCAAAATCTTCTCAAGCTCTTGACATTTTGTTCAAGTGTTGATTATAATGGTGAAGTTTTCAAGGCTATAGTTTATGAGTTTATGCCTATGGGGAGTTTAGAATATGTGATGCACAACGATAAACAACTCGAATTGAGAAATCCAAATATCAACTTTACGCAAAGTGTAAGTGTTGCCCTGGATGTAGCTCACGCATTGGATTATCTTCACAATAGTTTTGAGCAAGTTGTCGTTCATTGTGATATTAAGCCAAGCAATGTTCTACTTGATGATGAAATGGTTGCCTACTTAGGAGATTTTGGGTTAGCTAGGTTCCTTCATGATGCGACGATGATTTCAAGTAATGATCATGGTAGCTCCTATGCAGTTAAGGGAACCATTGGATATGTTCCCCCAGAGTATGGATTAGGTGGCCAACTATCACCACAAGGAGATGTCTTCAGCTATGGAATCCTTTTGTTGGAGATGCTAACCGGAAAAAGACCAACTGATTGCATGTTTGGTGAGGGTCTAAGCCTACACGAATTCTGTAAGAAGGCAATTCCAGACAAAATCACAGAGATAGTGGATTCACGGTTGCTTGTGCCATATGTCGGCGAACAGACAGAGGTTATTGAAGGCAACTATCGCAAAAGTTTGGTGTCCTTTGCTAAGATTGGAGTAGCATGTTCAGTAGAATTCTCCGCTCAGCGAATGAACATAAAAGATGCTATAACAGAATTGCATGCAATTAAACAGAATTTGGCACTCTGA | 3015 | 0.3751 | MRTYIMFLLYFATLSTTVALALSLSSVTDKHALLSLKVKLTNGEPDYLPSWNESLHFCEWEGVTCGRRHMRVFVLQLENQNLGGTLEPALGNLTFLKKLKLSNINLHGEIPREVGRLKRLQVLDLSKNKFHGKIPIELSNCTNIKEIILLYNQLTGHIPSWFGSMMQLNKLLLGANNLVGTIPPSLGNISSLQNITVARNQLEGSIPRVLGKLSNLKELNLGSNNFSGEIPYSLYNLSNIQVFVLGENQFFGYLPSNIHVAFPSLRAFLVGGNHFVGTFPCSISNLTKLRWFDISWNGFNGLIPPTLGSLSKLHRFHIGNNNFGNGGAPDLDFLYSLTNCTVLQELMLDDNRFGGVLQERIGNFSNHLTWLSMASNQISGRIPEGIGQLIGLTGFNMKKNFLEGTIPYSIGMLKNIVILVLQENNLFGNIPIVIGNLTVLSELYLHTNELEGSIPFTLRYCTKLQSFGASDNNLSGNIPNQTFAYLKDLINLDLSNNSLTGLIPSDFGNLKQLSILYLYANKLSGEIPDALAACLTLTELVLQRNFFHGSIPSFLGSSLRSLQILDLSSNNFSSIIPRELKDLTSLSILNLSFNNLYGEVPVGGIFNNITTISLVGNKDLCGGIPQLKLTACSRSPSKRHKGSFKVIFIIIIGGVLISFIVFITICYLRKKTRKLLSSPSLQNSHLGISYRELHEATNGFSSSNLIGTGNFGSVYKGSLIQFEGPIAVKVLKLETHGASKSFLAECKVLEKVKHQNLLKLLTFCSSVDYNGEVFKAIVYEFMPMGSLEYVMHNDKQLELRNPNINFTQSVSVALDVAHALDYLHNSFEQVVVHCDIKPSNVLLDDEMVAYLGDFGLARFLHDATMISSNDHGSSYAVKGTIGYVPPEYGLGGQLSPQGDVFSYGILLLEMLTGKRPTDCMFGEGLSLHEFCKKAIPDKITEIVDSRLLVPYVGEQTEVIEGNYRKSLVSFAKIGVACSVEFSAQRMNIKDAITELHAIKQNLAL* | 1005 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g2392 | 1004 | PRINTS | Leucine-rich repeat signature | 489 | 502 | - | - | |
Tpr4g2392 | 1004 | PRINTS | Leucine-rich repeat signature | 583 | 596 | - | - | |
Tpr4g2392 | 1004 | SUPERFAMILY | L domain-like | 366 | 622 | - | - | |
Tpr4g2392 | 1004 | ProSitePatterns | Protein kinases ATP-binding region signature. | 706 | 729 | IPR017441 | GO:0005524 | |
Tpr4g2392 | 1004 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 831 | 843 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr4g2392 | 1004 | Gene3D | Transferase(Phosphotransferase) domain 1 | 782 | 1003 | - | - | |
Tpr4g2392 | 1004 | Pfam | Leucine rich repeat N-terminal domain | 28 | 65 | IPR013210 | - | |
Tpr4g2392 | 1004 | SUPERFAMILY | L domain-like | 31 | 323 | - | - | |
Tpr4g2392 | 1004 | SMART | serkin_6 | 700 | 999 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g2392 | 1004 | Pfam | Leucine rich repeat | 472 | 523 | IPR001611 | GO:0005515 | |
Tpr4g2392 | 1004 | Pfam | Leucine rich repeat | 536 | 596 | IPR001611 | GO:0005515 | |
Tpr4g2392 | 1004 | ProSiteProfiles | Protein kinase domain profile. | 700 | 1004 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g2392 | 1004 | SUPERFAMILY | Protein kinase-like (PK-like) | 674 | 994 | IPR011009 | - | |
Tpr4g2392 | 1004 | PANTHER | LRR RECEPTOR-LIKE KINASE | 27 | 1003 | - | - | |
Tpr4g2392 | 1004 | Pfam | Protein kinase domain | 702 | 918 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g2392 | 1004 | Gene3D | Ribonuclease Inhibitor | 331 | 641 | IPR032675 | - | |
Tpr4g2392 | 1004 | Gene3D | Ribonuclease Inhibitor | 185 | 326 | IPR032675 | - | |
Tpr4g2392 | 1004 | ProSiteProfiles | Leucine-rich repeat profile. | 561 | 582 | IPR001611 | GO:0005515 | |
Tpr4g2392 | 1004 | SMART | LRR_typ_2 | 583 | 608 | IPR003591 | - | |
Tpr4g2392 | 1004 | SMART | LRR_typ_2 | 510 | 534 | IPR003591 | - | |
Tpr4g2392 | 1004 | SMART | LRR_typ_2 | 437 | 461 | IPR003591 | - | |
Tpr4g2392 | 1004 | SMART | LRR_typ_2 | 286 | 310 | IPR003591 | - | |
Tpr4g2392 | 1004 | SMART | LRR_typ_2 | 213 | 237 | IPR003591 | - | |
Tpr4g2392 | 1004 | SMART | LRR_typ_2 | 117 | 141 | IPR003591 | - | |
Tpr4g2392 | 1004 | SMART | LRR_typ_2 | 559 | 582 | IPR003591 | - | |
Tpr4g2392 | 1004 | SMART | LRR_typ_2 | 486 | 509 | IPR003591 | - | |
Tpr4g2392 | 1004 | Gene3D | Phosphorylase Kinase; domain 1 | 663 | 781 | - | - | |
Tpr4g2392 | 1004 | Pfam | Leucine Rich Repeat | 215 | 237 | IPR001611 | GO:0005515 | |
Tpr4g2392 | 1004 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 27 | 1003 | - | - | |
Tpr4g2392 | 1004 | Gene3D | Ribonuclease Inhibitor | 26 | 184 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g2392 | Tpr-Chr4 | 25473834 | 25477720 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g2392 | 28 | 1000 | Receptor kinase-like Gene Family | AT3G47570 | 42.655 | 0.0 | 748 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XII-1 | Tpr4g2392 | Pkinase | 3.5e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g2392 | - | - | gmx:100776429 | 1286.17 |