Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2388 ATGGAAACTATACTCTACTTTGTTATCATCTTTACAGTTCTTTTCTACCTTCACCGGAGAACTCGCCGGCGGCGACACAATCTCCCGCCGGGAAGTTTAGGACTACCCTTTATAGGAGAAACCTTCCAGCTTATCTCAGCTTACAAAACCGACAACCCAGAACCTTTCATAGACAAAAGAGTGAACCGGTACGGTTCAATTTTCACAACACATGTATTTGGTGAACCGACGGTTTTTTCAGCTGACCCGGAAACGAACCGGTTTATTTTAATGAATGAAGGGAAGCTATTTGAATGTAGTTATCCCGGTTCAATATCGAATCTTTTGGGAAAACATTCTTTGCTTCTTATGAAAGGTTCTTTACATAAGAGAATGCATTCACTTACTATGAGTTTTGCTAATTCTTCTATTATTAAAGATCATCTTCTTGTTGATATTGATCGGCTTATTCGGCTTAATTTGGATTGTTGGTCCGACCGGGTTTTGCTCATGGAGGAGGCCAAGAAGATAACATTTGAGTTGACAGTGAAGCAGCTGATGAGTTTTGATCCAGGTGAATGGACTGAGACTTTGAGGAAAGAGTACGTTCTCGTGATTGAAGGATTTTTCACACTTCCCTTACCATTACTCTCTAGTACCTACCGTAGAGCAATCAAGGCAAGAACGAAGGTGGCAGAGGCATTAACTTTGATTGTGAGGCAGAGAAGAAAAGAAAGTGTAATGGGCGAGACAAAGAATGACATGCTAGGGGCATTGTTGGCTTCCGGCGACCAGTTTTCGGATGAACAAATAGTTGATTTTATGTTGGCATTGCTCGTCGCCGGCTATGAAACCACCTCTACCATAATGACTCTTGCGGTCAAGTTTCTCACAGAGAATCCTCTAGCATTGGCACAACTCAAGGAAGAGCATGATCAAATAAGAGCAAAGAAGAGTTGCCAAGAGGAACCATTGGAGTGGATAGATTACAAGTCAATGGCATTTACTCAATGTGTTGTGAATGAAACTTTAAGAATGGCAAATATAATAAGTGGGATATTTAGGAGAGCAATGACAGATATCAATATCAAAGGCTACACTATTCCAAAGGGGTGGAAGGTCTTTGCATCATTTCGTGCCGTACATCTAAACCCCGATCATTTCAAAGATGCTCGCACTTTCAATCCATGGAGATGGCAGAGAAAATCAGAATCAACGTCCCCGGGAAATATATATACACCATTTGGAGGAGGGCCGCGGCTGTGCCCCGGCTATGAGCTAGCCAGAGTTGTGCTATCGGTATTTCTTCACCGCATTGTCACTCGTTACAGTTGGTCTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACCACTCGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGTAGAGTGCAATCGAATTCGGTCATGTAA 1419 0.4257 METILYFVIIFTVLFYLHRRTRRRRHNLPPGSLGLPFIGETFQLISAYKTDNPEPFIDKRVNRYGSIFTTHVFGEPTVFSADPETNRFILMNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDCWSDRVLLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLLSSTYRRAIKARTKVAEALTLIVRQRRKESVMGETKNDMLGALLASGDQFSDEQIVDFMLALLVAGYETTSTIMTLAVKFLTENPLALAQLKEEHDQIRAKKSCQEEPLEWIDYKSMAFTQCVVNETLRMANIISGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQRKSESTSPGNIYTPFGGGPRLCPGYELARVVLSVFLHRIVTRYSWSPAEEDKLVFFPTTRTQKRYPIIVKRRVQSNSVM* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2388 472 Gene3D Cytochrome P450 17 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PANTHER CYTOCHROME P450 26 6 464 - -
Tpr4g2388 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Tpr4g2388 472 SUPERFAMILY Cytochrome P450 20 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 Pfam Cytochrome P450 204 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g2388 472 PANTHER CYTOCHROME P450 90A1 6 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2388 Tpr-Chr4 25426318 25435037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2388 117 465 Cytochrome P450 AT5G05690 80.000 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2388 K09588 - gmx:100781291 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2388 4 25426318 25435037 Tpr4g2388 4 25426318 25435037 ECH
Tpr7g0938 7 8596523 8604784 Tpr4g2388 4 25426318 25435037 PCT