Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2382 ATGAAGACCAATTCACTCTCTTCCGTCGTCTTTTCCACTTTCACCGTCGTCTTTATCATTTTTTCATCACCCTTCTGCAATGCTCTCGGCTCCGGCACCACCCTCGCCGTAGTTGACTCCACCGGAACAGTTTGCGGCGTAGTATCAGCAGAAAAAACTCAAAACATTGTTTGTTACCGCCACGGGAAAATAATCTCCGCCGTGCCGGAAGTCTCTTTCTCATCAATCTCCGGCGGAAAAAACTACTTCTGTGGTATTAGGTCCGGTAACTACAGTATCCTATGTTGGGACACTGTTTCATCAAACACAACGTTTGAAAAAAGAAGACTGTACAACAATGGTACTGTTTTATACGAGAATCTTGCCGTCGGAGATTCCCATGTTTGTGCCACGGTGGTCGGAGTTGGAACTGTTTCTTGTTGGAGAATTGATAATGGTTTTATTTTGCCACCTGGGTATGATCAATTTTCATCAATAACTTCTGGGTTTGGATTCTCTTGTGGAATTTTGAAGAAAAACGGTTCTGGGTCAGTTCGTTGTTTTGGGAATGTGAATGAATCTTCCATTGCTGAAAAGATAGCAAAAGAGTTTTTGAATATTTCTATGGTGAGTCTTGTAGCTGGTGAGTCACATGTTTGTGGATTAAATTCAAAAGGGTTTTTAGTTTGTAAAGGAAGTAACAATTTTGGTCAAATTAATGTTCCTAATCAAGCTATACCTTTAGAGTATTCTGATTTAGCATTAGGATCTGAACATAGTTGTGCTATTAGAAGATCTAATGGTTCTGTTGTTTGTTGGGGTGGTAAAGATTTGTTTAATGTTAATGTTACAAAAAGTGTTTCTTTTGAGACTATTGTTTCTGGTTCAAATTTCATTTGTGGATTAACAACTAACAATTTTTCTGTTATTTGTTGGGGTCCTGGTTGGTTTGATAATGGTGGTTCAGTTTTTGAGCTTCCTTTGCCACCTATTCTACCTGGGATTTGTGTTCAATCTTCTTGTGGTGAATGTGGTATATATCCTCAATCTCAGTTTTTGTGTTCTGGTTTTGGTAACATTTGTAAGCCACAACCTTGTTGGCCTCAAATTTACGAAGTTCCGGCGCCGCCAATGATACAACCATCGCCGAATTTGGGGATGCCGGTTTCTAGATCAAAGACATTGACAAAGGAGTTGTTGGTGTTTGCTATTGTTGGATCCATTGGTGTGGTTGCTGGTTTTTGCACTTTGGTTTATTGTTTGTGGAATGGTGTGTGTTTTGGTAAGAAGAAAGTTCATAATTCAGTTCAACCAACAATTACTAGAGGTGGAAGTTTCAATTGTGGCACTTTTTCGAATCATAGTATGCTTTCGAGATCATCCACGATTAAGCGTCAGAGTTCGAGGATAATGAAACGTCAGAGAAGTGGAACATCTTCGACAAAGCATCCAGATAGATCTGAAGATTTCGCTCTTGCTGAGCTTGTTGCAGCCACCAACAATTTCTCACTTGGGAACAAGATTGGTGCCGGAAGCTATGGTGTTGTTTACAAAGGTAAACTCGCCGATGGCCGCGAGGTAGCAATCAAAAGGGGTGAAACTAGTACTAAGATGAAGGTTTTTCAAGAGAAAGAGAGTGCTTTTGAGTCCGAATTAGCCTTCTTGTCGCGTCTGCACCACAAGCATTTAGTTAGGCTAGTCGGTTTCTGCGACGAGAAAGATGAAAGGCTTTTGGTGTATGAGTTCATGAAGAATGGTGCATTGTATGATCATTTGCACGACAAGAACAATGTCGACAAGCATTGTAGTTTATTGAATTCTTGGAAAATGAGGATCAAAATCGCATTGGATGCTTCACGAGGAATCGAGTATCTCCACAATTACGCAGTTCCATCGATAATTCATCGAGACATAAAGTCTTCAAACATTCTCATTGACGCGGATTGGACAGCAAGAGTCTCCGATTTCGGATTATCAATGATGAGTCCGGATTCAGATCACGATTACCAACCAATGAAAGCGGCAGGAACAGTCGGATACATTGATCCGGAATACTATGGTCTAAATGTATTAACAGCAAAGAGTGATGTCTATGGTCTCGGAGTAGTTTTACTAGAACTATTAACAGGAAAAAGAGCTATATTCAAGAATGACGAAAACGGAGGAACACCGGTTAGTATAGTAGATTTTGCAGTGCCTATAATTATGAAAGGAGAATTGATGAAAATATTGGATCAAAGGGTTGAAAAACCAGAAATGAATGAAACAGAAGCAGTTGAATTGGTAGCATATACTGCTATGCATTGTGTGCATTTAGAAGGAAAAGATAGACCAACAATTTCTGATATTGTGGCAAATTTAGAACGTGCTTTTACTCTTTGTGATAGTAGTAGTCATGGTAGCATTTCTAGTGCTACAATCTCTATTGGATCTGACTGA 2418 0.397 MKTNSLSSVVFSTFTVVFIIFSSPFCNALGSGTTLAVVDSTGTVCGVVSAEKTQNIVCYRHGKIISAVPEVSFSSISGGKNYFCGIRSGNYSILCWDTVSSNTTFEKRRLYNNGTVLYENLAVGDSHVCATVVGVGTVSCWRIDNGFILPPGYDQFSSITSGFGFSCGILKKNGSGSVRCFGNVNESSIAEKIAKEFLNISMVSLVAGESHVCGLNSKGFLVCKGSNNFGQINVPNQAIPLEYSDLALGSEHSCAIRRSNGSVVCWGGKDLFNVNVTKSVSFETIVSGSNFICGLTTNNFSVICWGPGWFDNGGSVFELPLPPILPGICVQSSCGECGIYPQSQFLCSGFGNICKPQPCWPQIYEVPAPPMIQPSPNLGMPVSRSKTLTKELLVFAIVGSIGVVAGFCTLVYCLWNGVCFGKKKVHNSVQPTITRGGSFNCGTFSNHSMLSRSSTIKRQSSRIMKRQRSGTSSTKHPDRSEDFALAELVAATNNFSLGNKIGAGSYGVVYKGKLADGREVAIKRGETSTKMKVFQEKESAFESELAFLSRLHHKHLVRLVGFCDEKDERLLVYEFMKNGALYDHLHDKNNVDKHCSLLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDADWTARVSDFGLSMMSPDSDHDYQPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSIVDFAVPIIMKGELMKILDQRVEKPEMNETEAVELVAYTAMHCVHLEGKDRPTISDIVANLERAFTLCDSSSHGSISSATISIGSD* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2382 805 Pfam Protein kinase domain 497 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2382 805 SMART serkin_6 495 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2382 805 MobiDBLite consensus disorder prediction 451 478 - -
Tpr4g2382 805 ProSiteProfiles Protein kinase domain profile. 495 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2382 805 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 802 IPR044815 GO:0004674
Tpr4g2382 805 Gene3D - 195 317 IPR009091 -
Tpr4g2382 805 Gene3D - 26 194 IPR009091 -
Tpr4g2382 805 Gene3D Phosphorylase Kinase; domain 1 453 575 - -
Tpr4g2382 805 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Tpr4g2382 805 SUPERFAMILY Protein kinase-like (PK-like) 474 780 IPR011009 -
Tpr4g2382 805 Gene3D Transferase(Phosphotransferase) domain 1 576 794 - -
Tpr4g2382 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Tpr4g2382 805 SUPERFAMILY RCC1/BLIP-II 64 274 IPR009091 -
Tpr4g2382 805 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 6 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2382 Tpr-Chr4 25323529 25326769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2382 1 805 Receptor kinase-like Gene Family AT3G55950 58.014 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tpr4g2382 Pkinase 8.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2382 - - gmx:100798905 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0955 7 8800661 8803578 Tpr4g2382 4 25323529 25326769 ECH
Tpr4g2382 4 25323529 25326769 Tpr4g2382 4 25323529 25326769 ECH