Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2379 ATGGCTTTTTCAAACAACATCGAAGCAATTTTACAATTTCTAAGAAAAAATGGATTATCAGAAGCAGAATCTGCTCTCAAACAAGACATCATTGAAAACAACAACAACAACACTCATGTTGAATTTGATGTTGATGTTGATGTTGCTTCCTTTGACTACGAGAAATTCTTCTTTCCTATGGTTCCTCCTCCTCCTAAAGTTAGAGTCCGATCATTTTCACGGCCGCCGGAGTTTGTCTCCGGCGACGGTCAATTCTTCAAATCCAACTCTGTTTCTTCTGATGAACAGTTTGTTAGCATCGGTTCTTATACTTCTCGTTCTCGTGTTTCTTCTTCAGAATTCATCAATCCATATGGAATCAATTCATCATCTCAGACTTTGAATGATTCTGAATCTTCATCGGATAGATTGTCACAATTCGGCACAGCGCGTGATTATCACGATTTCGATATGCAACATGAACCATATTGGTATAATGAAAACGATGATGATGATTTCATGACTCCTGATTTTGAAGGACCGGATTTCTTTGCGTGTCAAAGTGAAGATAAGTTCGTTACAGAAAAAAACTACGAAGAAATTCGATTAATGGGAAATGAGGGTTACATGGACAAGCCGATGAAACCTTGCATTTGTAATCACTCATCTGTAAGTGATGAAAATGTGAATTATTCGAAAGATTACTGTCATGAGTCCGAGAAAGATGGTGTTGTGCATAATTGTGATGTTCCGTTTTGCAAAAGCAGTCCGGTTTCGGTTGGTTCTTGTAGCGAAGATCCTATAAACTTTAGCTACCCTAATTTGAAGGAAATTGATCTGAATGATTTTCATCTGAAGGATATTATTAAGTCTTTCGATTCTGCTCCATTGCTTACCGTGAAACAAAGTTTCGATTGCTACACTAAAAATGATAGTGGTGAGAGGTACAAGGATCCCTATGACTTAACTATCGATGTTGCTGAAACAGATCTACCGAATGGGATTGACGCCTATGAAGTAAGAGATGGTCAAGAGTTGAGTGAAGAATTACATGTTCCAGAGGTTGCTACAGATGGAGAGGATAATAATAATAATAATACTGATGATGAACTCTTAAAATACATTCAAGACGATGAATACGAAGTATTTGAGCTAAGAGTTGTTCATAGAAAGAACAGGACCGGATTTGAAGAAAACAAAGAAGTGCCAATTGTGATAAATTCAGTCATGGCGGGCAGGTACTACATAACAGAATATCTCGGTTCGGCTGCCTTTAGTAGGGTTGTTCAAGCTCACGATCTTCAGATGGGAATCGATGTTTGTTTGAAGATTATTAAAAATGACAAGGATTTCTTTGACCAAAGTCTAGATGAAATCAAGCTTCTGAAACTGGTCAATAAGCACGACCCCAGAGATAAACACCATATATTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTGACCGAACTTCTGCGTGCGAACTTGTATGAATTTCAAAAATTTAACCAAGAATCTGGAGGGGAAGCATATTTTACATTACACAGATTGCAGCTCATTACTCGACAATGTTTGGAGGCATTGCAATATTTGCATAACTTGGGAATTGTTCACTGTGACTTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAAATGTGAAGTAAAGATTATTGATCTCGGAAGCAGTTGCTTTAAAACAGACAATCTGTGCCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCACTCGGCTGTATTTTGGCTGAGCTATGCTCCGGTGAAGTGCTATTTCCAAATGACTCAGTTGTGATGATTCTCGCGCGCATGATTGGAATGTTTGGTCCTTTTGATATGGAGATGTTGGTGAAAGGGCAGGAAACGCACAAGTATTTCACCAAAGAGTATGACATTTACTTTGTGAATGAGGAGACAGATCAACTAGAGTACATAATTCCAGAAGAATCGTCATTGGAGCAGCACCTACAGATCACTGATATTATGTTTATCGACTTTGTCAGTTACTTGCTTACTATCAACCCCAAAAGAAGACCTACTGCAAGACAGGCACTAAAACATCCATGGCTTTCTTATGATTACACTTCCATGTAA 2151 0.3798 MAFSNNIEAILQFLRKNGLSEAESALKQDIIENNNNNTHVEFDVDVDVASFDYEKFFFPMVPPPPKVRVRSFSRPPEFVSGDGQFFKSNSVSSDEQFVSIGSYTSRSRVSSSEFINPYGINSSSQTLNDSESSSDRLSQFGTARDYHDFDMQHEPYWYNENDDDDFMTPDFEGPDFFACQSEDKFVTEKNYEEIRLMGNEGYMDKPMKPCICNHSSVSDENVNYSKDYCHESEKDGVVHNCDVPFCKSSPVSVGSCSEDPINFSYPNLKEIDLNDFHLKDIIKSFDSAPLLTVKQSFDCYTKNDSGERYKDPYDLTIDVAETDLPNGIDAYEVRDGQELSEELHVPEVATDGEDNNNNNTDDELLKYIQDDEYEVFELRVVHRKNRTGFEENKEVPIVINSVMAGRYYITEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPRDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLHRLQLITRQCLEALQYLHNLGIVHCDLKPENILIKSYKKCEVKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDSVVMILARMIGMFGPFDMEMLVKGQETHKYFTKEYDIYFVNEETDQLEYIIPEESSLEQHLQITDIMFIDFVSYLLTINPKRRPTARQALKHPWLSYDYTSM* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2379 716 Gene3D Phosphorylase Kinase; domain 1 401 488 - -
Tpr4g2379 716 SMART serkin_6 407 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2379 716 SUPERFAMILY Protein kinase-like (PK-like) 396 711 IPR011009 -
Tpr4g2379 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Tpr4g2379 716 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 713 - -
Tpr4g2379 716 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 713 - -
Tpr4g2379 716 Pfam Protein kinase domain 409 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2379 716 Gene3D Transferase(Phosphotransferase) domain 1 461 709 - -
Tpr4g2379 716 CDD PKc_DYRK_like 407 709 - -
Tpr4g2379 716 ProSiteProfiles Protein kinase domain profile. 407 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2379 Tpr-Chr4 25294146 25298877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2379 404 704 MAP Kinase Gene Family AT5G19010 31.776 1.58e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Tpr4g2379 Pkinase 3.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2379 - - gmx:100783988 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2379 4 25294146 25298877 Tpr4g2379 4 25294146 25298877 ECH