Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2363 ATGAATCTTTCTGGATCTTTGTGGTTTGTAACAGTAACAGTGTGTTTCTTGTTTCTTAACTTGAGTTTTTGTTGCTATTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTGAAGAAGAGAATAACTAGTGACCCTTTTGATGCTTTGTTAAATTGGGTTGATGATGAAGTTGTTCTTGATCCTTGTGATTGGTTTGGAGTTGAATGTTCAGATACAAAAAAAGTTGTAGTCTTGAATTTGAAAGACCTTTGCCTTGAAGGAACTTTAGCACCAGAGCTTATGAACCTAGTTCACATAAAGTCTATTATTTTAAGGAACAACTCTTTCTATGGAACCATACCTGAAGAAATTGTAGGCTTGAAAGAATTGGAGATTTTGGATTTGGGATATAACAATTTCAGTGGACATTTAGATGCTAATTTTGGTCATAATATCTCATCACTAGCAATTCTTTTGCTAGATAACAATGAGCTCCTTGTTGGTTTCTCTCCCAAAATCAATGAGCTGAAAATGCTCTCGGAGTGTCAAGTAGACGAAAATCGGTTAATCAATGCAGCTAAGATGCCATCTTGTTCCGAAAGATCCATCACATGGCATGTTCATGAAAATGAAGGTCCTAGGAGACTGTTACATTATCACAAACATCACCATCCTAATCGTAATAATCATACTTCTCGTAATCATACTTCGCCTCTATATAGATTTCCTCCTTCACATCCTCCATCGGCCACAGCAGTACCACTGGTCCCAAATCCAGCTTCAGATTCTCCTATTCAAAATGCTCCTGATTCTCCCAATCAAAATGCTTCAGATTCTCCTAATGATAATGCTTCAGATTCTCCTAATGAAAATGTTTCTGATTCTCCAACTCAAACCACATCATCAAAGAAGAATAAAGTTCCTATTCTCGCCGGAGTTATTATTGGTTGCGCTGTTTTTCTTGTGATTTCAAGCATTGGTATATATCTTTGTAAAACCAACAAAGTAGCTATTGTTAAACCTTGGACTACAGGAATAAGTGGACAACTTCAAAAGGCACTTGTCACCGGTGTCCCGAAGCTAAAGAGATCAGATCTTGAAGCAGCATGTGAAGATTTTAGCAATGTAATTGGCAATTCGCCGATTGGTACATTGTACAAAGGAACTTTGTCTAGTGGAGTTGAAATTGCTGTAGCTTCTGTTTCTGTCATACCAAAGAATTGGACAAAGGCTTTAGAAGCTCAATTTAGGAAGAAGATAGACACATTATCGAAAGTGAATCACAAGAATTTTGTCAATCTTATTGGTTATTGTGAAGAAGAAGAGCCTTTCACTAGAATGTTGGTTTTTGAATATGCTCCCAATGGAACATTATTTGAGCATTTACACGTAAAAGAAGCTGAGAACTTAAACTGGGGACCAAGACTTAGAATTGCAATGGGAATGGCTTACTGCCTACAACATATGCATGAATTGGATCCTCCTATGGTCCATACCAACTTGAGTTCTTCCGTCGTCCACCTAACCGATGACCACGCAGCGAAAATCTCGGATTTGAGTTTCTCCTACGAAATAGATTCATCTGAAAAGAAACCTGATGGTAAAAAACACAATGACATGATGCAATCAGCAAGTCCAGCAAGTAATGTTTACAGCTTTGGTGTTTTGTTATTCGAAATAGTTACCGGTCGAATCCCTTATTCGGTTGATAATAGCTCACATGAAAATTGGGCATCACATTATCTAAAATGGGACAAACCACTTAAGGAAATGGTGGATTCAACTCTAACATCTTACCAAGAAGATCAGGTGGAACAAGTTGCTGAACTGATAAGAGTTTGTGTCGATCCGGATTCGGAGAAGAGACCGAGAATGAATGAAGTGAGTGAGAGATTGAGAGAGATAACGAAAATGCCGCCCGAATTTGTAGTTCCAAAACTTTCTCCACTTTGGTGGGCTGAGATTGAGATTTCTTCTTGA 1962 0.3792 MNLSGSLWFVTVTVCFLFLNLSFCCYSLNEEGNALLKLKKRITSDPFDALLNWVDDEVVLDPCDWFGVECSDTKKVVVLNLKDLCLEGTLAPELMNLVHIKSIILRNNSFYGTIPEEIVGLKELEILDLGYNNFSGHLDANFGHNISSLAILLLDNNELLVGFSPKINELKMLSECQVDENRLINAAKMPSCSERSITWHVHENEGPRRLLHYHKHHHPNRNNHTSRNHTSPLYRFPPSHPPSATAVPLVPNPASDSPIQNAPDSPNQNASDSPNDNASDSPNENVSDSPTQTTSSKKNKVPILAGVIIGCAVFLVISSIGIYLCKTNKVAIVKPWTTGISGQLQKALVTGVPKLKRSDLEAACEDFSNVIGNSPIGTLYKGTLSSGVEIAVASVSVIPKNWTKALEAQFRKKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHVKEAENLNWGPRLRIAMGMAYCLQHMHELDPPMVHTNLSSSVVHLTDDHAAKISDLSFSYEIDSSEKKPDGKKHNDMMQSASPASNVYSFGVLLFEIVTGRIPYSVDNSSHENWASHYLKWDKPLKEMVDSTLTSYQEDQVEQVAELIRVCVDPDSEKRPRMNEVSERLREITKMPPEFVVPKLSPLWWAEIEISS* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2363 653 PANTHER PROTEIN MALE DISCOVERER 2 7 653 - -
Tpr4g2363 653 SUPERFAMILY Protein kinase-like (PK-like) 350 626 IPR011009 -
Tpr4g2363 653 Pfam Protein tyrosine and serine/threonine kinase 368 626 IPR001245 GO:0004672|GO:0006468
Tpr4g2363 653 ProSiteProfiles Protein kinase domain profile. 365 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2363 653 MobiDBLite consensus disorder prediction 257 297 - -
Tpr4g2363 653 Gene3D Transferase(Phosphotransferase) domain 1 447 635 - -
Tpr4g2363 653 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Tpr4g2363 653 Gene3D Phosphorylase Kinase; domain 1 338 446 - -
Tpr4g2363 653 Gene3D Ribonuclease Inhibitor 27 230 IPR032675 -
Tpr4g2363 653 PANTHER LRR RECEPTOR-LIKE KINASE 7 653 - -
Tpr4g2363 653 SUPERFAMILY L domain-like 35 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2363 Tpr-Chr4 25043491 25047399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2363 15 626 Receptor kinase-like Gene Family AT5G16000 24.961 5.55e-45 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tpr4g2363 PK_Tyr_Ser-Thr 2.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2363 - - lja:Lj2g3v2794510.1 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0980 7 9075635 9079459 Tpr4g2363 4 25043491 25047399 PCT