Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2340 ATGGACACTTCTACTACAGAGAAGAACAACAACACCAACACTCACCAAATTTTGCAACTTGGGATGAGAAATGCAGCAAAAAGACACAATTTTTACACCAACCCACTTCATTTTTTCAGGTTAATTTTCATTTGCATCTTCTGGGTCAATTTTCTATGGCTTCCTATGAAGCCAGTTTTGTGTGAAGAGCATTGGGATGGAGTTGTTGTAACACAGTCAAATTTCTTAGCACTTCAAGCATTCAAAGAAGAGTTAATTGATCCAAAAGGGTACTTGAAAACATGGAATGATAGTGGCTTTGGAGCTTGTTCTGGAGCTTGGGCTGGAATCAAGTGTGCTCAAGGACAAGTTATTGTAATTCAGCTTCCATGGAAAGGATTAAAGGGTAAAATCACTGATAGGATTGGTCAACTTGAAGGTCTTAGAAAGCTTAGTCTTCATAATAATCAAATTAGTGGTTCAATCCCTTCATCATTAGGACTTTTAATCAATCTTAGAGGAGTTCAACTCTTTAATAATAGGTTAACAGGTTCAATCCCTCCTTCATTAGGTTATTGTCCTATGCTTCAATCTTTAGATTTTAGTAACAATTTGCTCACAGGTACAATCCCTGAGAGCTTTGGAAATGCCACTAAGCTTTATTGGCTTAACATAAGTTTCAATTCATTGTCTGGTTCAATACCAACTAGTTTAACTAGCTTGAATTCTCTCACTTTCATATCTCTTCAACACAATAATCTCTCAGGTTCTGTCCCTAATTCATGGGGTGGTAGCTTGAAAAATGGATTCTTTAGGCTTCAAAATCTTGTATTGGATCATAACTTCTTGACAGGAACAATTCCTGCTTCTTTAGGTAACTTAAGAGAACTTAGAGAGATTTCTCTTAGTCATAACCAATTTAGTGGCCATATTCCTCAAAGTATTGGTAACATTTCAAATCTTAAACTGCTTGATTTGTCATTGAATAATCTCAGTGGAGAAATTCCCATTTCTTTTGATAATCTTGATAGTCTTAATTTCTTCAATGTTTCTCATAATAACCTCTCCGGTCCCGTTCCAACTTTACTAGCACAGAAATTTAACTCGAGCTCGTTTGTCGGAAATATTCAATTATGTGGTTATAGTCCTTCCACTCAATGTCCCTCTGTAGCTCCTTCTGAAGTACCTGCAGCACCTTCAGAAGCACCGAAACACCGCCATCACAAGAAACTAGGTACGAAAGACATAATCCTCATTGTAGCAGGAGTGCTCCTTGTACTCCTGATAATAGTCTGCTGCATTCTGCTCTTCTGTCTGTTCCGAAAAAGGAAAACATCGAATGCCGAGGGTGGACAGGCTACAGCGAGAGCAGCAGCTGCTGCTGGAAGGACAGGAAAAGGAGTCCCTCCTATCGGTGGAGAAGTTGAAACGGGCGGTGACGCTGGAGGCAAACTGGTTCATTTTGATGGACCATTGGCTTTTACAGCTGACGATCTCCTGTGTGCGACGGCCGAGATAATGGGAAAGAGCACATATGGAACAGTGTATAAGGCAACATTAGAGGATGGTAGTCAAGCTGCGGTGAAACGATTGAGGGAAAAAATCACCAAGAACCAAAGAGATTTTGAATCTGAAGTTAGTGTTCTAGGGAGAATTAGACATCCAAATCTTTTGGCAATGAGAGCCTATTACTTGGGACCTAAAGGAGAAAAGCTTCTGGTTTTCGATTATATGCCTAAAGGAAGTCTTGCTTCTTTCCTACATGCTCATGGACCTGAAATAAGAATTGATTGGCCAATAAGGATGAACATAGCACAGGGCATGGCTCGCGGCTTGTTATACCTACATTCACATGAGAACATTATACATGGGAACCTAACTTCAAGCAATGTATTGCTTGATGAGAACATAAATGCAAAAATAGCAGATTTTGGTCTATCAAGGTTGATGACAACTGCTGCCAACTCAAATGTAATTGCTACTGCCGGAGCATTAGGATACCGAGCTCCCGAGCTATCGAAACTGAAAAAAGCAAACACAAAAACTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTCCTAACAAGGAAGCCACCTGGTGAGGCACTGAATGGTGTTGATTTACCTCAGTGGGTTGCCTCTATTGTTAAAGAGGAGTGGACAAATGAAGTTTTCGACGTCGATTTGATGAGAGATTCATCTACAAATGGTGATGAATTGCTAAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGGCCCGAAGTTCAGCTGATACTTCAGCAGCTAGAAGAGATTAGACCACAGCTATCATCAGCCATTTCTAGTGATGAAGGAGCTATCCCTTCAACAAGTGAATAA 2358 0.4012 MDTSTTEKNNNTNTHQILQLGMRNAAKRHNFYTNPLHFFRLIFICIFWVNFLWLPMKPVLCEEHWDGVVVTQSNFLALQAFKEELIDPKGYLKTWNDSGFGACSGAWAGIKCAQGQVIVIQLPWKGLKGKITDRIGQLEGLRKLSLHNNQISGSIPSSLGLLINLRGVQLFNNRLTGSIPPSLGYCPMLQSLDFSNNLLTGTIPESFGNATKLYWLNISFNSLSGSIPTSLTSLNSLTFISLQHNNLSGSVPNSWGGSLKNGFFRLQNLVLDHNFLTGTIPASLGNLRELREISLSHNQFSGHIPQSIGNISNLKLLDLSLNNLSGEIPISFDNLDSLNFFNVSHNNLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTQCPSVAPSEVPAAPSEAPKHRHHKKLGTKDIILIVAGVLLVLLIIVCCILLFCLFRKRKTSNAEGGQATARAAAAAGRTGKGVPPIGGEVETGGDAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKNQRDFESEVSVLGRIRHPNLLAMRAYYLGPKGEKLLVFDYMPKGSLASFLHAHGPEIRIDWPIRMNIAQGMARGLLYLHSHENIIHGNLTSSNVLLDENINAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTRKPPGEALNGVDLPQWVASIVKEEWTNEVFDVDLMRDSSTNGDELLNTLKLALHCVDPSPSARPEVQLILQQLEEIRPQLSSAISSDEGAIPSTSE* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2340 785 ProSiteProfiles Protein kinase domain profile. 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2340 785 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 46 323 - -
Tpr4g2340 785 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 295 777 - -
Tpr4g2340 785 Gene3D Ribonuclease Inhibitor 187 260 IPR032675 -
Tpr4g2340 785 SUPERFAMILY Protein kinase-like (PK-like) 498 768 IPR011009 -
Tpr4g2340 785 Pfam Protein tyrosine and serine/threonine kinase 497 762 IPR001245 GO:0004672|GO:0006468
Tpr4g2340 785 SUPERFAMILY L domain-like 73 372 - -
Tpr4g2340 785 CDD STKc_IRAK 500 765 - -
Tpr4g2340 785 Pfam Leucine rich repeat 189 247 IPR001611 GO:0005515
Tpr4g2340 785 Pfam Leucine rich repeat 265 324 IPR001611 GO:0005515
Tpr4g2340 785 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 295 777 - -
Tpr4g2340 785 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 46 323 - -
Tpr4g2340 785 Gene3D Ribonuclease Inhibitor 268 380 IPR032675 -
Tpr4g2340 785 ProSiteProfiles Leucine-rich repeat profile. 140 162 IPR001611 GO:0005515
Tpr4g2340 785 Pfam Leucine rich repeat N-terminal domain 76 112 IPR013210 -
Tpr4g2340 785 Gene3D Phosphorylase Kinase; domain 1 500 571 - -
Tpr4g2340 785 SMART LRR_typ_2 234 257 IPR003591 -
Tpr4g2340 785 SMART LRR_typ_2 138 162 IPR003591 -
Tpr4g2340 785 SMART LRR_typ_2 287 311 IPR003591 -
Tpr4g2340 785 Gene3D Ribonuclease Inhibitor 74 186 IPR032675 -
Tpr4g2340 785 Gene3D Transferase(Phosphotransferase) domain 1 572 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2340 Tpr-Chr4 24774970 24778262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2340 65 767 Receptor kinase-like Gene Family AT3G51740 57.419 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g2340 PK_Tyr_Ser-Thr 5.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2340 - - gmx:100811174 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2340 4 24774970 24778262 Tpr4g2340 4 24774970 24778262 ECH