Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2323 ATGTCTAATTCAATTTCCACTACCACCGAAATTAATACCCCACTTCTACAACAAAACCACTCAGTACTCCCAAAACAAGAAGACTCAATTCCACAAAATGGAACAATTTCAGGAGCAGTATTCAATATATCAACAACAATGGTCGGTGCCGGAATCATGTCGATTCCGGCAACGATGAAAGTTCTCGGAATAATTCCGGGATTAATTGTGATTTTATCGGTGGCAGTTATAACAGATTTAACTGTTGAGTTTATGTTGAGGTTTACAAGTTCTGGTAAAGCGGTTACTTATGCGGGTATGGTGGGTGAGTCTTTTGGTTCTGTTGGATCTCTTGCTGTTAAGATTTGTGTTATTACCACTAATCTTGGTGTTCTTATTGTCTATTTCATTATTCTTGGTGATGTGCTATGTGGAAATGAGTTCAACGGTACCACACATTTAGGTATTCTACAACAATGGTTTGGCATCCACTGGTGGACCTGTCGCGCGTTTGCTCTTCTTATTGTTGCACTCTTCATTATGCTCCCTCTAGTTATGTTACGCCGTGTAGATTCACTCAAGTACAGTTCTGCATTATCAATCGCGCTAGCATTGGTTTTTGTTGTAATATGTTCCTCAATGGCATTTCATTCATTATGGTCCGGAAAAACACAGTCGGTGAGACTATTTCCTGATTTCTCGCAAGTCACTGCCCTTGATCTTTTCACCACTGTTCCTGTATTTGTCACAGGCTTTGGATTTCATGTTAATGTTCATCCCATTAGAGCAGAGCTTGTAAAACCATCAGACATGAGTATCGCCGTGCGACTTTCGTTATTAATCTCCGTTGCCATTTACTTTGCTATCGGATTCTTTGGGTACCTATTATTCGGGGACTCAATCATGCCGGATGTGTTGATAAACTTCGACCAGAACTCCGATTCGAGTGTTGGTCGATTGCTAGATGACATTATTCGGCTAAGCTACGCGCTCCATCTCGCACTTGTGTTTCCTATCATGTTCTATTCCTTGAGGGCCAACATCGATGAATTATTATTCTCAAATAAGCGTCCTTTGGCTTTGGACACCCGAAGATTTGTGTCACTCACTCTTGTTTTGCTAGCATTCACATATTTTGTGGCTGTGGAAATTCCAAATGTTTGGTACTTTTTTCAATTCTTGGGATCTACCACCATTGTTTGCCTCTCATTCCTCTTCCCTGCTGCAATCATTTTAAGGGATATGCATGGTATATCAAAAACAATAGATCAAGTAATGGCAACAGTGGTGATTATTTTGGCTGTTGGGACAAGTGGAATTGCTATATGGACCAACTTAAATGGTTCCAGTGCTGATTAA 1338 0.4043 MSNSISTTTEINTPLLQQNHSVLPKQEDSIPQNGTISGAVFNISTTMVGAGIMSIPATMKVLGIIPGLIVILSVAVITDLTVEFMLRFTSSGKAVTYAGMVGESFGSVGSLAVKICVITTNLGVLIVYFIILGDVLCGNEFNGTTHLGILQQWFGIHWWTCRAFALLIVALFIMLPLVMLRRVDSLKYSSALSIALALVFVVICSSMAFHSLWSGKTQSVRLFPDFSQVTALDLFTTVPVFVTGFGFHVNVHPIRAELVKPSDMSIAVRLSLLISVAIYFAIGFFGYLLFGDSIMPDVLINFDQNSDSSVGRLLDDIIRLSYALHLALVFPIMFYSLRANIDELLFSNKRPLALDTRRFVSLTLVLLAFTYFVAVEIPNVWYFFQFLGSTTIVCLSFLFPAAIILRDMHGISKTIDQVMATVVIILAVGTSGIAIWTNLNGSSAD* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2323 445 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 9 443 - -
Tpr4g2323 445 PANTHER AMINO ACID TRANSPORTER 9 443 - -
Tpr4g2323 445 Pfam Transmembrane amino acid transporter protein 34 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2323 Tpr-Chr4 24585356 24588595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2323 17 445 Amino Acid or Auxin Permease AAAP Family AT3G56200 50.926 2.47e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2323 - - ahf:112765408 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1022 7 9717363 9722352 Tpr4g2323 4 24585356 24588595 PCT