Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2322 ATGGCATTTTCGTCTTTCACTAAATTCAATAATTCAAAACCAAACTTCTATAAAACCCAATCTTCCGTACATTCATCATCCTCAAAAAAACAAAACAAACCAAAAACAACAACACTTGATCATACTTTTTCCTCCATCGTCGCCGGAATAATGTCGCCGGTGACCGGAGCAAACATACCTCTATTGCCAGGATCAAAGGTATCTCCTGAACCGGCGGCAACGGTTTCCGGTGCGGTGTTTAATGTTGCGACGAGTATAATTGGCGCCGGAATTATGTCACTTCCGGCGACTTTGAAAGTTCTCGGAGTGATTCCGGCGTTTGTTTTGATTTTGGTGATTGCTTTATTGGCGGAAATATCGGTGGATTTTTTGATGAGGTTTACACATTCAGGTGAAACGACGACGTATGCTGGTGTTATGAGAGAAGCTTTTGGACCTTTAGGAGCTGTTGCAACTCAACTTTGTGTTGTGATTACTAATCTTGGGTGTTTAATTATGTACTTAATTATTATTGCTGATGTACTTTCTGGAAATAAACCTGATGGAGAAGTACATTTGGGTCTTTTGCAACAATGGTTTGGAATTCATTGGTGGAATTCAAGGGAATTTGCTTTAGTCATCACTTTAATCTTCATTTTGCTCCCATTGGTATTGTACCGTCGTGTAGAGTCGTTGAAGTTTAGTTCTGCAGTATCAACTCTACTTGCTGTGGCATTTGTTACAATATGTTCTGTGTTGGCAATTATTGCTCTTGTGGAAGGAAAAACACAAACACCTAGATTGGTTCCTCGTTTGGACCATGAAACTACTTTCTTTGATCTTTTCACTGCTGTTCCTGTTATTGTCACAGCCTACACATTTCATTTTAATGTACATCCAATTGGATTTGAGCTAGGAAAACCATCAGACATGACAACAGCAGTGAGAATAGCACTAATCCTATGTGCAATCATATACTTCTCAATAGGTCTATTTGGTTACCTTTTATTTGGTGATGCAACTCAATCAGACATTCTCATAAACTTTGATAACAATGCTGATTCATCATTTGGTTCATTACTCAATACTTTGGTCCGTTTAAGCTATGCTTTTCATGTCATGCTAGCATTTCCTCTCCTCAATTTCTCATTGAGAACAAATATTGATGAATTCTTCTTCCCTAAAAGACCTTTGTTAGCTACAGATAATAAGAGATTTGTGGCTATTACTTTGGTGCTTTTGGTTTTTAGTTACATTGCTGCTGTCGCAATTCCGGATATTTGGTTCATTTTTCAGTTTATGGGATCAACTTCTGCTGTTTGTCTTGCTTTTGTGTTCCCTGGTTCTATTGTTCTAAGGGATATTCATGGTATATCAACAAGAAAGGACAAAATTATAGCACTAGTAATGGTTATACTAGCTGTAGTAACAAGTGTGATTGCTGTTGCCAACAATATATATAATCTTTTTTAG 1452 0.3753 MAFSSFTKFNNSKPNFYKTQSSVHSSSSKKQNKPKTTTLDHTFSSIVAGIMSPVTGANIPLLPGSKVSPEPAATVSGAVFNVATSIIGAGIMSLPATLKVLGVIPAFVLILVIALLAEISVDFLMRFTHSGETTTYAGVMREAFGPLGAVATQLCVVITNLGCLIMYLIIIADVLSGNKPDGEVHLGLLQQWFGIHWWNSREFALVITLIFILLPLVLYRRVESLKFSSAVSTLLAVAFVTICSVLAIIALVEGKTQTPRLVPRLDHETTFFDLFTAVPVIVTAYTFHFNVHPIGFELGKPSDMTTAVRIALILCAIIYFSIGLFGYLLFGDATQSDILINFDNNADSSFGSLLNTLVRLSYAFHVMLAFPLLNFSLRTNIDEFFFPKRPLLATDNKRFVAITLVLLVFSYIAAVAIPDIWFIFQFMGSTSAVCLAFVFPGSIVLRDIHGISTRKDKIIALVMVILAVVTSVIAVANNIYNLF* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2322 483 Pfam Transmembrane amino acid transporter protein 74 480 IPR013057 -
Tpr4g2322 483 PANTHER AMINO ACID TRANSPORTER 53 483 - -
Tpr4g2322 483 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 53 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2322 Tpr-Chr4 24580495 24583837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2322 61 482 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.906 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2322 - - cam:101493057 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2322 4 24580495 24583837 Tpr4g2322 4 24580495 24583837 ECH
Tpr4g2322 4 24580495 24583837 Tpr7g1022 7 9717363 9722352 PCT