Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2319 ATGGCTTCATTTTGTTCTAACATGATTGGTTTTTCCCTTTTGCTTCTTGTATTAATGGGGAATACAAATGCAACACTTTCAAAAGATTATTACTATAATTCTTGTCCAAAACTCTATGAAACTGTGAAGTGCACAGTTGAATCTGCCATAGCAAAAGAGACCCGCATGGGTGCTTCTCTTCTGCGTTTGTTCTTCCATGATTGTTTTGTTAATGGATGTGACGGTTCAATTTTGCTCGATGACACATCAAGCTTTACAGGAGAAAAAACTGCAATTCCCAACAAAAATTCTGCGCGTGGATTTGAAGTGATCGACCAAATCAAGTCAGCGGTGGAGGAAGTGTGCCCAGGTGTAGTCTCATGTGCTGATATCCTTGCCGTCACCGCTAGAGATTCCGTTGAGATTCTTGGAGGTCCAAGTTGGGATGTAAAACTTGGAAGAAGAGATGCTAGAACCACCAGTAAATCAGCTGCAAACAAAGATATCCCAGCACCCACTTCAAGCCTCAACCAACTCATCTCAAGATATAATGCCCTTGGTCTTTCCACCAAGGATTTGGTCGCATTGTCTGGTGGTCACACAATTGGACAAGCAAGATGCACTAACTTTAGAGATCACATATACAACGACACCGACATAGATACCTCCTTTGCTCGGACAAGGCAATCAGGGTGCCCCAAGACATCAGGGTCAGGAGACAATAACTTGGCACCCCTTGATCTCGCGACACCGACATCCTTTGACAACCATTACTTCAAGAACCTTGTTGATAGCAAGGGACTACTCCACTCTGACCAAGTACTCTTCAATGGTGGATCCGCTGATTCCATAGTGCATGAATATAGCGTAAATCCAAGCTCTTTTTTCTCTGATTTTGTCACTGCCATGATCAAGATGGGAGACATTAGTCCTCTCACCGGCTCAAATGGAGAGATAAGAAAGAATTGCAAGCGTGCGAACTAA 963 0.4341 MASFCSNMIGFSLLLLVLMGNTNATLSKDYYYNSCPKLYETVKCTVESAIAKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKTAIPNKNSARGFEVIDQIKSAVEEVCPGVVSCADILAVTARDSVEILGGPSWDVKLGRRDARTTSKSAANKDIPAPTSSLNQLISRYNALGLSTKDLVALSGGHTIGQARCTNFRDHIYNDTDIDTSFARTRQSGCPKTSGSGDNNLAPLDLATPTSFDNHYFKNLVDSKGLLHSDQVLFNGGSADSIVHEYSVNPSSFFSDFVTAMIKMGDISPLTGSNGEIRKNCKRAN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2319 320 Gene3D Peroxidase, domain 2 163 299 - -
Tpr4g2319 320 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 SUPERFAMILY Heme-dependent peroxidases 26 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PANTHER PEROXIDASE 72-RELATED 14 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Tpr4g2319 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PANTHER PEROXIDASE 14 319 - -
Tpr4g2319 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g2319 320 Gene3D - 29 320 - -
Tpr4g2319 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tpr4g2319 320 CDD secretory_peroxidase 26 318 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2319 Tpr-Chr4 24529299 24531472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2319 24 320 Peroxidase AT5G05340 72.727 1.29e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2319 K00430 - gmx:100803637 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3033 3 32795049 32796543 Tpr4g2319 4 24529299 24531472 ECH
Tpr3g3637 3 40422862 40425422 Tpr4g2319 4 24529299 24531472 ECH
Tpr4g2319 4 24529299 24531472 Tpr4g2319 4 24529299 24531472 ECH