Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2318 ATGAATATAAATTTTCATGGTTTCTTCTTCCTCCTCCTTTCAATCTTTTTATTTTCCACCTTAGCTTTTGGAGCCACTCTGTCCAAAGATGAAGTGGAAGCTCTTAAAGATATAGCTAAGACACTTGGGAAGAAAAATTGGGATTTCAGTGTAGATCCATGTAGTGGAGAAAGGAATTGGACATCTGCTGAAGAGAAAGGAAGTGAAAATGCTGTCACATGCGATTGTACCTATGTCAATGCTACTGTTTGTCATGTGACTCACATAATTTTGAAACAACAAAATCTCCCGGGCACTCTCCCACAGGAATTGGTCAGGCTACCTTATCTTCAAGAATTTGATGTTACCCGCAATTACCTGAACGGTACAATTCCTAAAGAATGGGGCTCCATGAATAATCTTCTTAACATCTCCCTCCTTGGAAATCGATTAACTGGATCAATACCAATAGCATTAACAAACATATCAACTCTCCAAAGTTTGGGATTGGAGTCCAATCAATTTTCTGGACGTCTTCCTCCTGAGCTTGGGAATCTAAACCAAATTCAAAGACTGTTAATTTCTTCCAACAATTTCACTGGAGAACTACCTGCTACATTGGCCAAACTCACCACATTACAAGATATTCGAATTGGAGACAATCAATTCTCTGGGAAGATACCTGATTTTATTCAAAACTGGACAAATCTCACAAAATTAGTTATTCAAGGGAGTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCAGTTTTGAAAAAATTGACTGACTTGAGAATCAGTGATTTAAGTGGATCTGAACAATCTTTTCCTCAACTTAGTGATATGAAATTGAAATATCTGATTCTAAGGAATTGCAACATCAATGGAACACTGCCTGAGTATCTTGGGGCAATGACTAGTCTAAAAAACTTAGATCTCAGCTTTAACAAGTTGAGTGGACCAATTCCAAATGACTATGATACTCTAAGAAAAGTGGATTATTTTTATTTAACTGGAAACCTTCTCACTGGACAAGTTCCTTCATGGGCACAAAAAGCTGATAGCTTAGATATTTCATACAATAACTTCACTCTAAGCCAAGGGAGTCAATGTCAAGATGGACATCTGAACTTGTTTTCTACCTCATCGACCCGGAATGACTCAGGAATAGCTTCATGTTTGACAAGCTTTGAGTGTCCTAAAACTTCATCATATGCTCTTCATATAAACTGTGGTGGAGGGTCGGTAACAGTCAATGGAAGCACATATGACGATGATATGGATACAGCAGGACCAGCTAGCTTCCACCAGAGTGGGGGTAAAACTTGGGCATTTAGCACCACCGGTAACTTCATGGATATCGACGGCGCTGACTCTTACATCGTGTCAGATAAATCTATGCTTTCTGCGGCTAATTCTGAACTATTCAAGAATGCACGAGTTTCTCCTACATCTTTGACTTATTATGGATTTTGCATGGGAAATGGAAACTACACAGTAAATCTACATTTTTCAGAAATCATTTTCACTGATGATCAGACATATAACAGCCTAGGAAGGCGTATATTCGATATCTATATTCAGGGAGAGTTAGTACAAAAGGACTTCAATATTGCAAATGAAGCCGGAAGAATTGGCAAGGCAATCACGAAACCATTCACTGCTGTTGTGAGTCATAATACCTTGGAGATTCGCTTATATTGGGCCGGGAAAGGGACAACTAGTATACCATCTAGAGGAGTATATGGTCCTCTTATATCAGCAATAACTGTTGAACCAGATTTTACCCCTCCTTCCGAAAGTGGAAGTAGCAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGCTGCAGTAGCCATTGTTATCATCCTATTGTTTGTTATTCTTCGGCGAAAAGGCTATTTTGGAAAGAAAAGCTCTTTAGAAAGAGAGGTAAAGGGTTTAGACCTACAAATGAGTTTATTTAATGTAAGACAAATCAAAGGAGCAACAAATAACTTTGACATTGCCAATAAGATTGGAGAAGGAGGATTTGGTCCAGTATACAAGGGGCGTCTATCAGATGGTACATTGGTAGCAGTCAAGCAACTTTCTGCTAAATCAAAGCAAGGGAATCGCGAATTTTTAAATGAAATCGGCATGATTTCAGCGTTGAACCACCCTCATCTTGTTAAACTCTATGGATGTTGTGTGGAAGGAGATCAGTTAATGTTAATCTATGAATATTTGGAAAATAATAGTCTTGCTCGCGCTTTATTTGGGGCTGCAGAACACCAAATAAAATTGGATTGGCCAACAAGATACAAGATTTGTGTTGGTATTGCTAGAGGTTTAGCATATCTCCATGAAGAATCAAGATTGAAGGTTGTTCATAGAGACATCAAGGCAACTAATGTGTTGCTTGATAAAGATCTCAATCCGAAGATATCTGATTTTGGTTTGGCCAAACTCGATGAAGAGGAGAACACTCACATTAGCACTCGAATTGCCGGGACATATGGATATATGGCTCCAGAATATGCTATGCATGGTTATTTGACCGACAAAGCAGATGTCTATAGTTTTGGAATCGTCGCCTTGGAAATCTTACATGGTAGTAACAATACCACTCTTCGACAAAAAGGATCAGAAGCATTCCATCTTCTTGATTGGGCACATGTCTTGAAAGAGGAAAATAATCTATTAGAGCTAGTTGATAAAAGATTGGGATCAAATTTCAACAAAGAAGAAGCAATGGTAATGATAAATGTAGCACTATTATGCACTAATGTAACTTCAGCCCTTAGGCCAGCAATGTCTTCAGTGGTAAGCATGTTAGAAGGTAAAATTGCTATTAAAGAACTGATTTTAGAGTCAAGTGAAGTGTTGGATGAGAAAAAAATGGAAGCAATGAGACAATATTATAAAGACCATAGTATATCAATGGAAGAAGGACCATGGACTGCTACATCTTCTTCAGTAGCTACTGATCTTTATCCTGTAGATTCTTCTTACTTGGAGAAAAGAGTTTAG 2991 0.3835 MNINFHGFFFLLLSIFLFSTLAFGATLSKDEVEALKDIAKTLGKKNWDFSVDPCSGERNWTSAEEKGSENAVTCDCTYVNATVCHVTHIILKQQNLPGTLPQELVRLPYLQEFDVTRNYLNGTIPKEWGSMNNLLNISLLGNRLTGSIPIALTNISTLQSLGLESNQFSGRLPPELGNLNQIQRLLISSNNFTGELPATLAKLTTLQDIRIGDNQFSGKIPDFIQNWTNLTKLVIQGSGLSGPIPSGISVLKKLTDLRISDLSGSEQSFPQLSDMKLKYLILRNCNINGTLPEYLGAMTSLKNLDLSFNKLSGPIPNDYDTLRKVDYFYLTGNLLTGQVPSWAQKADSLDISYNNFTLSQGSQCQDGHLNLFSTSSTRNDSGIASCLTSFECPKTSSYALHINCGGGSVTVNGSTYDDDMDTAGPASFHQSGGKTWAFSTTGNFMDIDGADSYIVSDKSMLSAANSELFKNARVSPTSLTYYGFCMGNGNYTVNLHFSEIIFTDDQTYNSLGRRIFDIYIQGELVQKDFNIANEAGRIGKAITKPFTAVVSHNTLEIRLYWAGKGTTSIPSRGVYGPLISAITVEPDFTPPSESGSSSISAGAVVGIVAAVAIVIILLFVILRRKGYFGKKSSLEREVKGLDLQMSLFNVRQIKGATNNFDIANKIGEGGFGPVYKGRLSDGTLVAVKQLSAKSKQGNREFLNEIGMISALNHPHLVKLYGCCVEGDQLMLIYEYLENNSLARALFGAAEHQIKLDWPTRYKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEILHGSNNTTLRQKGSEAFHLLDWAHVLKEENNLLELVDKRLGSNFNKEEAMVMINVALLCTNVTSALRPAMSSVVSMLEGKIAIKELILESSEVLDEKKMEAMRQYYKDHSISMEEGPWTATSSSVATDLYPVDSSYLEKRV* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2318 996 Pfam Malectin domain 399 582 IPR021720 -
Tpr4g2318 996 ProSiteProfiles Protein kinase domain profile. 660 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2318 996 Gene3D Ribonuclease Inhibitor 274 347 IPR032675 -
Tpr4g2318 996 SMART serkin_6 660 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2318 996 Gene3D Ribonuclease Inhibitor 196 273 IPR032675 -
Tpr4g2318 996 Gene3D Ribonuclease Inhibitor 30 195 IPR032675 -
Tpr4g2318 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 288 - -
Tpr4g2318 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 288 357 - -
Tpr4g2318 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 377 954 - -
Tpr4g2318 996 Gene3D Transferase(Phosphotransferase) domain 1 736 946 - -
Tpr4g2318 996 CDD STKc_IRAK 666 934 - -
Tpr4g2318 996 SUPERFAMILY Protein kinase-like (PK-like) 644 943 IPR011009 -
Tpr4g2318 996 Pfam Leucine rich repeat 276 335 IPR001611 GO:0005515
Tpr4g2318 996 Gene3D Phosphorylase Kinase; domain 1 627 735 - -
Tpr4g2318 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 377 954 - -
Tpr4g2318 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 73 288 - -
Tpr4g2318 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 288 357 - -
Tpr4g2318 996 SUPERFAMILY L domain-like 82 357 - -
Tpr4g2318 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Tpr4g2318 996 Gene3D - 395 586 - -
Tpr4g2318 996 Pfam Protein tyrosine and serine/threonine kinase 662 930 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2318 Tpr-Chr4 24500239 24510306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2318 21 962 Receptor kinase-like Gene Family AT1G53420 55.765 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr4g2318 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2318 - - gmx:732563 1433.7