Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2317 ATGTCCAGAGAAAGGGAGAGATTATTTGACGAAATAGGAAAGAAGAGGGAAGGAGATGATTCTTTTCAGAAGGGAAGAATGTTAGGTCCTTCTGGAACACTAAATACAACTACTCCTTGCGCTGCGTGTAAGCTTTTGAGACGAAGGTGTGCACAAGAATGCCCTTTTTCTCCATATTTCTCTCCTCATGAGCCTCAGAAGTTTGCTTCTGTCCACAAAGTCTTTGGTGCTAGCAATGTCTCAAAGTTGCTAATGGAGGTACCTGAGAATCAAAGAGCAGATGCAGCAAATAGTTTAGTTTATGAAGCTAATGTAAGACTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCATCTTTGCAACAACAAATTCAATCATTATTAGGTGAACTTAATGTTATAAGGGAAGAAATACATAAATACAAACTCATGGAAGCTAACATGATTCCTTCTTCAGAAGATTTATCAATTGCTAGTAGTACCCTACCATCTACAACATCACTACCTATGCTTCCTTCTTCCATTTACACACAACAAACAAATCCTACCAATTATAGCTCAATTTCAAGTGATCATATTTCCTATTTTGATTAA 597 0.3719 MSRERERLFDEIGKKREGDDSFQKGRMLGPSGTLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKLLMEVPENQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQIQSLLGELNVIREEIHKYKLMEANMIPSSEDLSIASSTLPSTTSLPMLPSSIYTQQTNPTNYSSISSDHISYFD* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2317 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 24 198 - -
Tpr4g2317 198 MobiDBLite consensus disorder prediction 1 30 - -
Tpr4g2317 198 Coils Coil 118 138 - -
Tpr4g2317 198 Pfam Lateral organ boundaries (LOB) domain 39 135 IPR004883 -
Tpr4g2317 198 ProSiteProfiles LOB domain profile. 38 139 IPR004883 -
Tpr4g2317 198 MobiDBLite consensus disorder prediction 1 23 - -
Tpr4g2317 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 24 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2317 Tpr-Chr4 24491216 24493507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2317 27 157 AS2 family AT2G40470 78.358 9.23e-68 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr4g2317 LOB 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2317 - - gmx:100786324 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2317 4 24491216 24493507 Tpr4g2317 4 24491216 24493507 ECH