Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2299 ATGGGTTTCACTGTTGGGTTAGTAAGAAATGTCTTCTCAAGAAATCATGCTATTAGGTCTCATGAAAGAAAGATAATGAGACGAAATTCTTCGGAAAATAGAAGATGGATATCTGTTAAATCATATCTGTGTGGCAATGAATTCAATTCAGTTCTTGCTGAGGAAGATTCAGCTTCAATTAAAAGCTCTGAAGTTACAGTTACACAATCCATACAAGAAGATTTGTTGAGTGATAAAGGAGAAACCAAGAGTGAAGAAACTGTTGAGAATGTAATAGAGAAAGGTACTAATTCAAACTCCAAATCATTGAATGAAGAAGAAGCAGCTATTATTATTCAATCAGCATATAGAAGTTTCAAGTTGAGGTGTAAAAATGAAGAAATCATAAGGTCAGAAACTGATGAAGAGAAGCTGAATTTAGTAACAGAAAGTCCAGATAGAAAATCTATGGCCACATCAGTTGAAGTACAAACAGGGAATTCCATTGAAATTTTCTCACTTGAAGGACAAAAAATGAGCATTTACAACAGAATTCAGAACAGGAACAGAACAAGAGCAATAAAGCAAAAGGAAGATTGGGATGATAGTACTGTGAGTAGCAATGTTTCAAAAATGAGGATGCAGAACAGAATGGAGGCATCAACAAGGAGAGAAAGAGCATTGGCTTATGCCTTCTCACAACAGCCAAGAATATGTTCAAAGAGAAAATTAGCAAAACATGAGAACAACATGGAACAAAATATGAGCTGGAGTTGGCTTGAAAGATGGATGGCAACCAGACTTCAAGACACTTCATCAGTTGAAAGCCATGCTATGAATCAGTATGAAAATTTCAACACTGATGATCTTCACAAATTCACTATAAAGACAAGATTTTTAGATGCTTCTGGTGGTGAAGAAAAAGAGAGTTGTGGATCAAATGAAGTGCCACTTCATTTTGATAACTATTCAATAAATTCACAAGATGAAACAGTTAGCAGCTTCAAATTGCCAACAACAAAAAAGACTAATTTTAAAGCTAGGAGAACTGTGTCTAGAAGGAAAACTGTGCCAAGTTATCAGTTCCATGATGAGAATCCTAAGGTGAGCATTAAAGATGGTTCAAGCAATGCTATTAAGGATATTAAGCAAAAACCAAAGCAAGATGGAAGCAAGACAGAAATAAGTCAAATGACAATTAACACCACCAAAACTTCTTCTGATGAGTAA 1209 0.3499 MGFTVGLVRNVFSRNHAIRSHERKIMRRNSSENRRWISVKSYLCGNEFNSVLAEEDSASIKSSEVTVTQSIQEDLLSDKGETKSEETVENVIEKGTNSNSKSLNEEEAAIIIQSAYRSFKLRCKNEEIIRSETDEEKLNLVTESPDRKSMATSVEVQTGNSIEIFSLEGQKMSIYNRIQNRNRTRAIKQKEDWDDSTVSSNVSKMRMQNRMEASTRRERALAYAFSQQPRICSKRKLAKHENNMEQNMSWSWLERWMATRLQDTSSVESHAMNQYENFNTDDLHKFTIKTRFLDASGGEEKESCGSNEVPLHFDNYSINSQDETVSSFKLPTTKKTNFKARRTVSRRKTVPSYQFHDENPKVSIKDGSSNAIKDIKQKPKQDGSKTEISQMTINTTKTSSDE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2299 402 MobiDBLite consensus disorder prediction 384 402 - -
Tpr4g2299 402 ProSiteProfiles IQ motif profile. 105 134 IPR000048 GO:0005515
Tpr4g2299 402 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Tpr4g2299 402 PANTHER IQ-DOMAIN 33 1 379 - -
Tpr4g2299 402 MobiDBLite consensus disorder prediction 340 402 - -
Tpr4g2299 402 Pfam IQ calmodulin-binding motif 107 124 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2299 Tpr-Chr4 24283931 24287839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2299 1 354 IQD Protein Family AT5G35670 39.216 7.78e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2299 - - mtr:MTR_5g084680 674.085