Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2293 ATGAGGCTTATATGCATATTCATAGCATTGCTAATATTGATAACACAAATTAGCATGGTGGCTTGCAAGACTAGAAATCATGTACCAGCAGTAATTGTGTTTGGTGACTCAACTGTTGATTCTGGTAACAACAACAAGATAGCAACACTTCTCAAGAGCAACTTTAAACCTTATGGCCGTGATTTCGAAGGTGGCCGCCCTACCGGACGGTTTTGTAACGGTCGTGTTCCAACGGACTTCATTGCTGAGGCTTTTGGTGTTAAGAAAAATATACCGGCATATTTCGATCCTGCTTATACCATTGATGATTTTGTTACTGGTGTTTGCTTTGCTTCGGCTGGAACTGGATATGATAATGCAACTTCTGATGTGCTAAATGTGATACCACTATGGAAGGAGGTAGAGTACTTCAAGGAGTATCAAGAAAAATTGAGAATCCATGTTGGTAAAGAGAAGGCAAATTATATAATAAGTGAAGCATTATACGTAATAAGCTTAGGAACCAATGATTTCCTAGAAAATTACTATATTTTCCCAACAAGACGACTTCATTTCACTGAATCACAATATCAAGATTTTCTAGTGGATATTGCTGAGAATTTTGTTAGGAAAATATATTCACTTGGTGCTAGGAAATTATCCATAGCTGGTCTTGTTCCTATTGGGTGTGTCCCATTAGAGAGGACTATAAATATTTTAGGTGACCATGATTGCAATGAAAAATACAACAACGTGGCTTTAGGATTTAATGCCAAATTGGAGAATATGATATCAAAGGTAAATAAGGAGCTCCCACAATTGAAGGCCTTGTCGTTAAATGCTTATGATATTGCCAATGATATCTTTACAAGACCTTCCTACTATGGATTTGAGGTGGTAGAGAAGGCATGTTGTTCAACTGGAACAATTGAGTTAAGCTACTTATGCAGTGATAAGAGTCCACTTACATGCAAAGATGCAAACAAATATGTGTTTTGGGATGCTTTTCATCCTACTGAGAAGACAAACCGCATAGTTTCAAATTATTTAATCCCTAAACTTTTTGCAGCTTATAGATGA 1059 0.3683 MRLICIFIALLILITQISMVACKTRNHVPAVIVFGDSTVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRVPTDFIAEAFGVKKNIPAYFDPAYTIDDFVTGVCFASAGTGYDNATSDVLNVIPLWKEVEYFKEYQEKLRIHVGKEKANYIISEALYVISLGTNDFLENYYIFPTRRLHFTESQYQDFLVDIAENFVRKIYSLGARKLSIAGLVPIGCVPLERTINILGDHDCNEKYNNVALGFNAKLENMISKVNKELPQLKALSLNAYDIANDIFTRPSYYGFEVVEKACCSTGTIELSYLCSDKSPLTCKDANKYVFWDAFHPTEKTNRIVSNYLIPKLFAAYR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2293 352 Coils Coil 250 270 - -
Tpr4g2293 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tpr4g2293 352 SUPERFAMILY SGNH hydrolase 31 347 - -
Tpr4g2293 352 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Tpr4g2293 352 CDD SGNH_plant_lipase_like 29 346 IPR035669 -
Tpr4g2293 352 Gene3D SGNH hydrolase 17 349 IPR036514 -
Tpr4g2293 352 PANTHER GDSL ESTERASE/LIPASE EXL3 10 350 - -
Tpr4g2293 352 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2293 Tpr-Chr4 24208042 24221302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2293 4 344 Pollen Coat Proteome AT1G75910 35.159 1.48e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2293 - - gmx:100809260 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2293 4 24208042 24221302 Tpr4g2293 4 24208042 24221302 ECH