Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2292 ATGAGGCTTATATGCATATTCATAGCATTGCTAATATTGATAACACAAATTATCATGGTGGCTTGCAAGACTAGAAATCATGTACCAGCAGTAATTGTCTTTGGTGATTCTTCTGTTGATTCTGGAAACAACAATAAGATAGCAACACTTCTCAAGAGCAACTTTAAACCATACGGCCGTGACTTCGAAGGTGGTCGCCCCACAGGACGGTTTTGTAATGGTCGTGTTCCGCCGGACTTCATCGCGGAGGCTTTTGGTGTTAAGAAAAATATACCAGCGTATTTGGATTCTGCTTATACCATTGATGATTTTGTCACCGGTGTTTGTTTTGCTTCTGCTGGAACTGGATATGATAATGCAACTTCTGATGTACTAAATGTAATACCACTATGGAAGGAGATAGAGTACTTCAAGGAGTATCAAGAAAAATTAAGAGCTCATGTCGGTAAAGAGAAGGCAAATTATATAATAAGTGAAGCATTATATCTAATAAGCTTAGGAACCAATGATTTCCTAGAAAACTATTATATTTTCCCAACAAGACAATTTCATTTCACCGAATCACAGTATCAAGATTTTCTAGTGGATATTGCTGAGAATTTTGTTAGGAAAATATATTCACTCGGTGCTAGGAAATTGTCCATAACTGGCCTTATTCCTATGGGGTGTCTACCATTAGAGAGGGCAACAAATATTTTAGATAACCATGGTTGCAATGAAAAATACAACAATGTGGCTTTGGAATTTAATGCAAAATTGGAGAATATGATATCAAAGGTAAATAGGGAGCTCCCACAAGTGAAAGCTTTGTCGGCAAATGCTTATGATATTATCAATGATATCATTACACGTCCTTCCTTCTATGGATTTGAGGAGGCAGAGAAGGCATGTTGTTCCACAGGAACATTTGAAATGAGCTACTTATGCAGTGATAAAAATCCACTTACATGCAAAGATGCTAACAAATATGTGTTTTGGGATGCCTTTCATCCCACCGAGAAGACAAACCGGATAGCTGCAAACTATTTAATTCCTAAACTTTTTGCGGCTTATAGATGA 1059 0.372 MRLICIFIALLILITQIIMVACKTRNHVPAVIVFGDSSVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGVKKNIPAYLDSAYTIDDFVTGVCFASAGTGYDNATSDVLNVIPLWKEIEYFKEYQEKLRAHVGKEKANYIISEALYLISLGTNDFLENYYIFPTRQFHFTESQYQDFLVDIAENFVRKIYSLGARKLSITGLIPMGCLPLERATNILDNHGCNEKYNNVALEFNAKLENMISKVNRELPQVKALSANAYDIINDIITRPSFYGFEEAEKACCSTGTFEMSYLCSDKNPLTCKDANKYVFWDAFHPTEKTNRIAANYLIPKLFAAYR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2292 352 Coils Coil 250 270 - -
Tpr4g2292 352 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 350 - -
Tpr4g2292 352 PANTHER GDSL ESTERASE/LIPASE EXL3 11 350 - -
Tpr4g2292 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tpr4g2292 352 SUPERFAMILY SGNH hydrolase 31 348 - -
Tpr4g2292 352 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Tpr4g2292 352 CDD SGNH_plant_lipase_like 29 346 IPR035669 -
Tpr4g2292 352 Gene3D SGNH hydrolase 18 349 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2292 Tpr-Chr4 24195907 24202604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2292 4 344 Pollen Coat Proteome AT1G75910 36.232 1.08e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2292 - - gmx:100805486 585.489