Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2268 ATGGAATACCTTTATGGAGTTGCGTCTGCTGTTTCAAGAGATTTGGTGTGTGGTGTAATAGGTCAATTACGTTATCCCTGCTGCTTCAACAAATTTGTTCAAGACCTCGCAAAAGAAGAAGGTAATTTGGCTGCAACAAGAGATGGTGTCCAAGACCGCGTTACACAAGCCAAGAAGCAAACTAGGAAGACTGCTGAGGTTGTTGATAGGTGGTTGAAGGATGCTAACCATGTCATGGACGATGTTGATCAGTTACTACAAATGGCAAAAACAGAAAATAACTCATGTCTCGGGCACTGTCCAAATTTGATTTGGCGATACCGTGTAGGCAGGAAGTTAGCAAATAAAAAAAGAGACCTTAAACTGCGCATTGAAGAAGGTAGACAATATATACAGATTGAACGCCCTGCTTCACTTTCAGCAGGCTATTTTTCTTCTGAAAAATGTTGGGAGTTTGATAGTAGAAAACCTGCTTATGAGGAACTTATGCGTGCTTTGGAAGATGATGATGTTACTATGATTGGATTGTATGGGATGGGGGGTTGTGGTAAAACAATGCTTACAATGGAAGTAGGCAAGAGATGTGGTCATCTTTTTGATCAAGTGGTTTTTGTGCCTATATCTAGTACTGTAGACTTGGAAAGGATCCAGGAAAAAATTGCAGGCTCTCTTGAATTTGAATTCCAAGAAAAAGACGAAATGGACAGATCACAACGCTTATGCATGAGGTTCAGACAAGAAGATAGGGTTCTTGTGATTCTGGATGATGTGTGGCAGATGCTAGATTTTGATGCCATAGGGATTCCTTCTAGTGAACATCATAAAGGTTGCAAGGTTCTCATTAGCAGTAGATCTGAAGCAGTTTGTACTTTGATGGATTGCCAGAAAAAAATTCATCTATCAACACTAACCAATGATGAAACGTGGGATCTTTTCCAAAAGCAAGCACTAATATCTGAATGCACTTCGATTACTGTACAGAGTTTGGCAAGACAAATTTCAAATGAATGTAAAGGCTTGCCCGTCGCCATTGTAGCAGTGGCTAGCAGCTTGAAAGGTAAGGCTGAGGTGGAATGGAAGGTTGCATTGAATAGATTGAGAAGTTCGAAACCTGTTAATATCGAAAAAGGTTTGCAAAACCCGTACACATGCTTGCAGTTAAGCTATGATAATCTGGACACTGAAGAGGCCAAGTCACTATTCTTGTTGTGTTCCGTGTTTCCTGAAGATTGTGAAATTCCTGTGGAGTTTTTAACTAGGTCTGCAATAGGGCTAGGCATAGTTGGAGAAGTTCACTCATATGAAGGGGCAAGGGATGAAGTGAGTGTGGCGAAAAATAAGCTCATAAGTTCTTGTTTGTTGCTAGATGTTGATGAAGGAAAATGTGTCAAAATGCATGACTTAGTTCGCAATGTAGCTCATTGGATTGCGCAGAATGAGATTAAATGTGCCTCGAAGAAGGATGTTATGACTTTGGAACATACTTCACTAAGATATCTATGGTGTGAGAAATTTCCAAATAATTTGTATTGTTCCAGTCTTGACTTTCTACACATTCACACACTTACACAAGTATCAGATGAAACTTTCAAAGGAATGGGAATGCTCAGAGTTTTGTTTCTTTACAACAAGGGTCGGGAGAGAATGCCATTGTTGACTACATCGTTAAAATCGTTGATGAATCTTCGTTGCTTACTCCTGAGTAAATGGGATTTAGTTGATATCTCGTTTGTGGGAGATATGAAGAAACTTGAAAGTCTTACATTGTGTTATTGTTCATTCCTTGAATTACCTGATGTTGTTACAGAATTGACTAACTTGAGATTGTTGGATTTGTCAGAATGTGACATGAAAATGAATCCGTTCGAAGTGATTGGGAGACACAGACAGCTGGAAGAATTGTACTTTACTGACTGTAGATCAAAATGGGAAGTTGAATTCTTAAAAGAGTTTAGTGCCCCCCAAGTATTACAGAGGTATCAAATACAATTAGGAAGCATGTTTTTCGGTTTCCAAGAAGCGTTTCTCAATCATCACAGAACTTTGTTTCTCAGTTATTTGGATGTATATAATGCCGCGACCGCGATCAAGGATTTGGCTGAAAAGGCAGAGGTCTTGTGTATAGCCGGTATTGAGGGAGGTGCTAAAAGTATCATGCCTGACATATTTCGAAGTATGAACCATTTAACTGAGCTTTGGATACGCGATTCTAAGGGGATAGAGTGTTTGGTTGACACTTGTCTGATCGAGGTAGGAACTCTCTTCTTCTGCAAGTTGCATTGGTTGAGAATTGAGCACATGGAGCATCTGGGAGCTTTATACAATGGTCGAATGCCTCTAGGTGGCCATTTTGAGAATTTAGAAGACCTATATATAAGCCATTGTCCAAAGCTAACATGTCTCTTCACACTTGCAGTTGCTCAAAATCTGGCACAACTTGAGAATTTACAAGTATTATCTTGCCATGCACTGAAGCATATACTAATTGATGACGATGATGATAGAGAGGAGATAATTGTATATGATCACAGACCGTTGTTTCCAAAATTAAAAAGGCTTCATGTTAGAGAGTGTAGTGAGCTGGAATACATAATCCCAATCACGTTAGCTCATGGTCTTGTACTTTTGGAGTGTTTGGAAATCGTATGTAATCAGAAGTTGAGATATATATTTGGCCAAAGCACACACAAAGCTGCTCAGAATCAGAATCAAGTCAAGATCGAGCTGTCGGCCCTGGAAGAGCTTACTCTTGTTATGTTGCCAAATATCAATAGCATTTGTCCCGAAGATTGTTATCTAATGTGGCCATCCCTGCTCAGTTTCAATTTGCGAAATTGTGCAGAGTTTTTCATGGTGTCTATCAATACTTGCATGGCTTTACACAACAATCCGATGATCAATGAAGCCTCGCATCAAACTCTGCAAAATATAAGAGAAGTTCGAGTCAATAACTGTGAGTTAGAAGGCATCTTTCAGCTAGTAGGACTACCCATTGATGGAGAAAAAGATCCACTAATGTCATGTTTGGAAATGTTGTATTTGGAAAATCTACCTCAGCTCAGGTATGTATGTAAGAGTAATGTAGAATCAACAAACATCCAATTCCAAAATCTTCAACAAATGGAGATATGTGGATGTCGAAGATTAAAATTTATCTTCTCATCCTTTATGGCTGGAGGGCTACCTCAACTGAAAGCGCTAAAGGTAGAAAAGTGCAACCAGCTAGATCAAATCGTTGAGGATATTAGCACTGCAATTCCTTTAGGATCATTTGGCCTTCCCAGCCTTGTAAGGTTAACACTAATATCATGTCCGATGCTGGGTTCACTGTTTACAGCATCCACTGCTAAAACCTTGACTTCATTGGAAGAATTGACAATAGAAGATTGTCATGGTTTAAAACAATTAGTAACTTATGGAAGAACTCTGCAAAATAGAAGGGGAGAAATAGTTCAGGATGATCATCATGACTTTCAGAGTTATGTGTCAATGTTTCAAAGTTTGAAAAGGATTAGTATTATGAGATGTCATTTGCTCAAGTATATATTACCTGTTTCATTTGGAAGAGGACTGGTGAAATTGGAAGCTATAGAAATCACAGATACTCCCGAGTTGAGATATGTATTTGGTCATTCTTCCCATCAATATCCAAACAAGTTCAAAATTGAGCTTCCTGCTTTGGAAAAAGTAGCACTCTACTGTATACCAAATCTGATCGCCATTTGTCCAGAAAACTACCATGCAACATGCTCATCTTTGCAACTTCTTGTCATGAATGATGTTGGTCTATCAATGAATAATTGGATGGTTGATTCTGGAGCCGCACACTCAGATCTTAGTTCTACTAAAACAGATGAAGGAGAAACAAGTATGCCTATTGAGAAGAAGTTAACGTCTGTTATTATTGAGAACGGATCCGAAATGGAAGGCATTTTTCAAATGAAGGGATCCCCAAGTGAGAATGGACAACAAGTAATGTCTTGGTTAGAAGACCTTAAATTGAACAATTTGCCAAAGCTAATGTACATATGGATGGGTTCCATACAACATTGTGTGAGCCTTCAACATCTTCACAAAATACATATTTGCAATTGTCCAACACTAAAATCTATCTTCTCCATCTCTGTCTTGAGAGTCCTGCCTCTGTTGAAGATCCTAGTGCTAGAACAATGTGAAGAATTGGAGCAAATCATTGAAGATGATGACGAAGAAAATGAAAATGTCCCGAATCCTCAAGTGTGGTTCTCGCAGCTAAAGTTTCTTCTTGTCACCCAATGCAACAAATTGAAGCATTTGTTTTCTTTCCACACATCCCATGAATTTCCAGAATTGGAATATCTGACCCTCAATCAAAATTCTAGTCTAGTTCAAGTGTTTAAAGTAGTTTCTGGTGTGCGAGAAGGGACAATGGAAATTTTGCTTCCAAAACTGAAACATGTAATGCTAATGCAACTGCCAAACCTCAATAATATATGTCAAGGGATTGAGTTTCAGACTCTCACCAATCTTTTGGTGCACAATTGCCCAAAATTCTTACTAACTTCAACGACTACTAACGAGGACATGCTACAAACCTGTGATAGTGACAAGGAAATTGGTTTCTATCTCCGTCCACACTTACATGACATAAGTTGTACAACAACAAATGACCACGAGTTCCTTACATCAAAGATCAAAAACAAAGGGATACAAGATTTACAATCACAGGAGCAGAAACTGTCACTCATTCCTTTACCAAACTTGACAGAGGAGTTTGTTAAAGGACAATCAATGGATGAACCTTATTTGACGAGACAACAAAAGCCACTTGGAGAATCTAGGTTTACTGAAGAGGAAACAGCATCAAAGAATGTGGATATAGTAGCTTTGTCAATTCATTCTGAATCTGATAGCTCACATTCAAGTCCATTAGCTACCTCTCAAAGTAGGTCACATCCACATTATGAAATCAGCTTCAGCCAAACCGAGACTTACACTAATAAAGAAAACAAAGACCGTCCTGTATATATAGGTGACTCGGAGGACAATGATCTCAAACCTGTCAAAGAAGATGATGAAAGTCAAATAGCCACACCTTGTGTTTCTGAAGCAACTGCAGTGTGTCATTCAACTGAATATAACTTCGTTGAAAAGGCTCTTTCTGACCTGGAAGAGTCTTTGAGGATACCTCTAAGGGACATAGCTAGCTCAGAGGCAAACAGCCTTCGCCTTCTAACGACTCTTAACTTCTTGTCCCACCTTTCTTTAAAAGATGTAGCTCTATCAGATGGACTCCAAGCTGTAATCGACACTATGCACACAGAATTCCCAACCATCCTACGCTCCTTCAAGCAAGCCTTTTCTATCACAGACAAATTTGCTATGACTGATGCTCATCATGACGAGGTAGCCATTACTCTTGCTTCCAAAATTTCCAACGCGGAAAGTTTTTTGAATGAAGCTCAACAGAGGGAAGCAGCTTTAAAGGAACAGATCATTCAATTGGAGAAAGAAGTAAAATGTCTTCAAGAGGAAAATGAAAAATGCATTCAAGAAACTATAGGCTACAAAATGGAGTTGGAGAATGTGGTCAAAGACAAGTATGAAATTTTGGAAGATCAAATGAAAGCTCGGCAACAAATATTTGAGGTCGATTATAAATGGTCTGCTTTACTTAGTCAGTTTCAGTACAACCACATTGTTGCAAGAAATCCTTCTTGA 5700 0.3888 MEYLYGVASAVSRDLVCGVIGQLRYPCCFNKFVQDLAKEEGNLAATRDGVQDRVTQAKKQTRKTAEVVDRWLKDANHVMDDVDQLLQMAKTENNSCLGHCPNLIWRYRVGRKLANKKRDLKLRIEEGRQYIQIERPASLSAGYFSSEKCWEFDSRKPAYEELMRALEDDDVTMIGLYGMGGCGKTMLTMEVGKRCGHLFDQVVFVPISSTVDLERIQEKIAGSLEFEFQEKDEMDRSQRLCMRFRQEDRVLVILDDVWQMLDFDAIGIPSSEHHKGCKVLISSRSEAVCTLMDCQKKIHLSTLTNDETWDLFQKQALISECTSITVQSLARQISNECKGLPVAIVAVASSLKGKAEVEWKVALNRLRSSKPVNIEKGLQNPYTCLQLSYDNLDTEEAKSLFLLCSVFPEDCEIPVEFLTRSAIGLGIVGEVHSYEGARDEVSVAKNKLISSCLLLDVDEGKCVKMHDLVRNVAHWIAQNEIKCASKKDVMTLEHTSLRYLWCEKFPNNLYCSSLDFLHIHTLTQVSDETFKGMGMLRVLFLYNKGRERMPLLTTSLKSLMNLRCLLLSKWDLVDISFVGDMKKLESLTLCYCSFLELPDVVTELTNLRLLDLSECDMKMNPFEVIGRHRQLEELYFTDCRSKWEVEFLKEFSAPQVLQRYQIQLGSMFFGFQEAFLNHHRTLFLSYLDVYNAATAIKDLAEKAEVLCIAGIEGGAKSIMPDIFRSMNHLTELWIRDSKGIECLVDTCLIEVGTLFFCKLHWLRIEHMEHLGALYNGRMPLGGHFENLEDLYISHCPKLTCLFTLAVAQNLAQLENLQVLSCHALKHILIDDDDDREEIIVYDHRPLFPKLKRLHVRECSELEYIIPITLAHGLVLLECLEIVCNQKLRYIFGQSTHKAAQNQNQVKIELSALEELTLVMLPNINSICPEDCYLMWPSLLSFNLRNCAEFFMVSINTCMALHNNPMINEASHQTLQNIREVRVNNCELEGIFQLVGLPIDGEKDPLMSCLEMLYLENLPQLRYVCKSNVESTNIQFQNLQQMEICGCRRLKFIFSSFMAGGLPQLKALKVEKCNQLDQIVEDISTAIPLGSFGLPSLVRLTLISCPMLGSLFTASTAKTLTSLEELTIEDCHGLKQLVTYGRTLQNRRGEIVQDDHHDFQSYVSMFQSLKRISIMRCHLLKYILPVSFGRGLVKLEAIEITDTPELRYVFGHSSHQYPNKFKIELPALEKVALYCIPNLIAICPENYHATCSSLQLLVMNDVGLSMNNWMVDSGAAHSDLSSTKTDEGETSMPIEKKLTSVIIENGSEMEGIFQMKGSPSENGQQVMSWLEDLKLNNLPKLMYIWMGSIQHCVSLQHLHKIHICNCPTLKSIFSISVLRVLPLLKILVLEQCEELEQIIEDDDEENENVPNPQVWFSQLKFLLVTQCNKLKHLFSFHTSHEFPELEYLTLNQNSSLVQVFKVVSGVREGTMEILLPKLKHVMLMQLPNLNNICQGIEFQTLTNLLVHNCPKFLLTSTTTNEDMLQTCDSDKEIGFYLRPHLHDISCTTTNDHEFLTSKIKNKGIQDLQSQEQKLSLIPLPNLTEEFVKGQSMDEPYLTRQQKPLGESRFTEEETASKNVDIVALSIHSESDSSHSSPLATSQSRSHPHYEISFSQTETYTNKENKDRPVYIGDSEDNDLKPVKEDDESQIATPCVSEATAVCHSTEYNFVEKALSDLEESLRIPLRDIASSEANSLRLLTTLNFLSHLSLKDVALSDGLQAVIDTMHTEFPTILRSFKQAFSITDKFAMTDAHHDEVAITLASKISNAESFLNEAQQREAALKEQIIQLEKEVKCLQEENEKCIQETIGYKMELENVVKDKYEILEDQMKARQQIFEVDYKWSALLSQFQYNHIVARNPS* 1900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2268 1899 MobiDBLite consensus disorder prediction 1627 1647 - -
Tpr4g2268 1899 Pfam NB-ARC domain 160 391 IPR002182 GO:0043531
Tpr4g2268 1899 PANTHER - 23 949 - -
Tpr4g2268 1899 PANTHER - 1353 1511 - -
Tpr4g2268 1899 PANTHER - 1120 1373 - -
Tpr4g2268 1899 PANTHER - 974 1134 - -
Tpr4g2268 1899 SUPERFAMILY RNI-like 1009 1396 - -
Tpr4g2268 1899 PRINTS Disease resistance protein signature 173 188 - -
Tpr4g2268 1899 PRINTS Disease resistance protein signature 244 258 - -
Tpr4g2268 1899 PRINTS Disease resistance protein signature 337 351 - -
Tpr4g2268 1899 PRINTS Disease resistance protein signature 602 618 - -
Tpr4g2268 1899 Gene3D Ribonuclease Inhibitor 1155 1466 IPR032675 -
Tpr4g2268 1899 Gene3D Ribonuclease Inhibitor 476 908 IPR032675 -
Tpr4g2268 1899 Gene3D Ribonuclease Inhibitor 909 1154 IPR032675 -
Tpr4g2268 1899 Coils Coil 1804 1845 - -
Tpr4g2268 1899 Gene3D - 302 388 IPR042197 -
Tpr4g2268 1899 Gene3D - 389 475 IPR036388 -
Tpr4g2268 1899 MobiDBLite consensus disorder prediction 1592 1612 - -
Tpr4g2268 1899 CDD AAA 176 283 - -
Tpr4g2268 1899 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1353 1511 - -
Tpr4g2268 1899 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 23 949 - -
Tpr4g2268 1899 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 974 1134 - -
Tpr4g2268 1899 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1120 1373 - -
Tpr4g2268 1899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 404 IPR027417 -
Tpr4g2268 1899 SUPERFAMILY L domain-like 456 891 - -
Tpr4g2268 1899 Gene3D - 145 299 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2268 Tpr-Chr4 23803881 23815447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2268 170 639 WRKY Transcription Factor Family AT5G45050 23.764 1.09e-09 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2268 - - cam:101501248 2947.92