Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2250 ATGGATACTCATACACCCTCTACTTCCACCCATAATCCCTTTTGTTCCACAGTTAACAACAATAATTTGGTCATAAGCTGGATTCCCGCTACTCCTCTCCGTAAGATGGTAGCACTGGCTTCCATCGCAGCCGGCATCCAATTTGGATGGACACTGCAGCTCTCCCTGCTCACACCCTATGTGCAGCTTCTGGGAGTTCCACTCGTCGGCTATTACAGTGACCGTGCCCATTCATCTTCTTTGGCATCATTGCAGTGGCAATTACTTTTGCGGTTAATTTCAGTTTCCCGTTTGCTTTGGCATCAATTTACTCCAACGCAACAGAGGCCGGGCAAGATTATAGTATCTTCATTGAGTGGACAATGGGATAAGTTGTTTGGTGGCAAAATGTCCTTTTTTGGCCACTCTGACACCGGACGATATGGGCCATATGGCCAATGCATCGAGGAACGGAAGTGGTTTCCATTGATCGTTGCAAAGCAAATTAATTGGTGTCGGGGCTTCTCATACGTCTGTTTCTTTCTGCTTCTGTAG 534 0.4682 MDTHTPSTSTHNPFCSTVNNNNLVISWIPATPLRKMVALASIAAGIQFGWTLQLSLLTPYVQLLGVPLVGYYSDRAHSSSLASLQWQLLLRLISVSRLLWHQFTPTQQRPGKIIVSSLSGQWDKLFGGKMSFFGHSDTGRYGPYGQCIEERKWFPLIVAKQINWCRGFSYVCFFLLL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2250 177 PANTHER SUGAR TRANSPORTER 29 67 - -
Tpr4g2250 177 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 29 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2250 Tpr-Chr4 23600334 23601588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2250 31 78 Sucrose Transporter Gene Family AT5G06170 57.353 1.02e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2250 K15378 - fve:101295188 74.7146