Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2249 ATGGCTCTTTTATGGGAAAAGTTGAATACTCTTGGAACTCATGTGAATATTGTTAACTCTTTGGAAGACAATTTAGACTTAACCGTTCACTGTAAATCTAAGGATGATGATCTCGGAGCTCATCTTCTGCATCATGGTGGTAACTTTGGTTTTAGTTTTAATCCTAAATTCCCAGTTGGCACTACACTATTCTTCTGTTCCTTTCAATGGAATGGTGAAAAATTACGTTATTTTGATATATTCATCAGCGGTGATTACGCTAGAGCTGATTGTGATTATTGCAATTGGAGTATATTTAAATCAGGACCATGTAGAAATAGAGATCCGATGCAACGTGTTTGCCTTCCATGGAATAAGTAA 360 0.3583 MALLWEKLNTLGTHVNIVNSLEDNLDLTVHCKSKDDDLGAHLLHHGGNFGFSFNPKFPVGTTLFFCSFQWNGEKLRYFDIFISGDYARADCDYCNWSIFKSGPCRNRDPMQRVCLPWNK* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2249 119 Pfam Plant self-incompatibility protein S1 14 117 IPR010264 -
Tpr4g2249 119 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 9 115 - -
Tpr4g2249 119 PANTHER - 9 115 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2249 Tpr-Chr4 23598494 23599289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2249 13 118 Carbohydrate Esterase AT3G16970 44.144 1.02e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2249 - - mtr:MTR_1g058500 122.864