Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2237 ATGAAACCAATCAAATTCAGATTATTACTTCTACTCTTGTTACTGGCCTTTACTGCAGAATCATACTGCACCAAAACTTGTGACGTAGCTTTAGCTTCCTACAATATACAAATAGGTTCAAACTTAACATATATTTCATACATCATGATATCCAAGGTTGTTTCAGAACCTGAAGATATTTTCAGCTACAACAAGGACACATTACAAAGCCCAAATAGTCTCCTAGGCGATTCGAGAGTGAATGTTCCCTTCACTTGTGATTGCATCAATAATGAGTTTCTTGGTCACACTTTTCTATATGAGCTTCACCAAGGAGATACCTATGCTTCAATTGCTGAATTCACTTTTAGCAATTTGACTAATGAGGAGGGGTTGCAAAGATTCAACGTTTATAGTCCAGATAATATTCCTGTTGATGGAACTCTTAATGTTACTGTTAACTGTTCATGTGGGAATAGAGAGGTTTCTAAGGATTATGGTTTGTTCATCACATACCCTCTTACTTCTAAGGACACTTTGGAGTCTATTGCAAAGGATAACAAACTTGATGCTGAGTTGCTTCAGCGGTACAACCCTGGTGTGAATTTCAGCCAAGGAACTGGTCTTGTTTTTATTCCAGGAAAAGGAAGCGGAGCTATTGCCGGAATATCTGTTGGAGTACTAGCAGGGATTTTACTATCGTCGTTTGGTGTGTATGTTAAATATTACCTAAAGAAGAAAGCATGGAAGAAAAATTTGACCTTAGATGATTCCAAGATGATGAACTCAGCTCAAATTGGTACCGAAATCACAGGCCTTTTGGTGGAAAAATCACAAGAGTTTTCATACAAAGAACTTTCCATTGCCACAAATAAGTTCAGCATGTCTAATAAAATTGGTGAAGGCGGTTTTGGAGAAGTCTTCTATGCAGAGCTGAGAGGCCAGAAAGCCGCAATCAAGAAGATGAGGATGAAAGCATCCAAGGAATTTTGTGCTGAATTGAAAGTCTTAACTCGTGTTCATCACTTGAACCTAGTAGGTTTGATTGGATATTGTGTTGAAGGTTTTCTCTTCCTTGTCTATGAATACATTGACAATGGAAACTTAAGTCAAAATCTCCGCGATTCAGAAAGAGAATCTTTGACGTGGTCTACAAGGATGCAAATCGCGCTGGATTCAGCTAGAGCTCTTGAATATATTCATGAACATACCGTACATGGATATATCCATCGCGACATAAAGTCAGAAAATATTTTATTAGACAAAAGGTTTCGTGCAAAGGTTACAGATTTTGGATTATCCAAGCTTGCTGACGTTGAAAATTCAACTTCATCTAATAAGATCGTGCAGGGTACATTCGGTTACATGCCACCAGAATACGCGCGTGGTGGTGTTGCTCCTTCTCCAAAAATCGATGTCTATGCCTTTGGAGTTGTTCTATATGAACTTATTTCTGCTAAACAAGCTGTAATCCGTGATGGACCTGAAGTAAAAGGCCTTGTAGCTTTGTTTGATGAAGTGTTTGATCATGAAACAAATCCGACAGAAGCTCTGAAAAATCTGGTGGATCCTAGACTTGGAGATAACTACTCAGTTGATTCAGTTTGCAATATAGCAAAACTAGCCAAAGCATGTACAATGAAGGATCCGCAACTACGTCCAAGCATGAGATCTGTTGTGGTTGCTCTTACGACACTAACTTCTACTACTGAGGATTGGAATGTTTCATCTTTTTTTGAAAATCCAGCTTTTGTAAATTTAATGTCCGGAAAATAG 1755 0.3829 MKPIKFRLLLLLLLLAFTAESYCTKTCDVALASYNIQIGSNLTYISYIMISKVVSEPEDIFSYNKDTLQSPNSLLGDSRVNVPFTCDCINNEFLGHTFLYELHQGDTYASIAEFTFSNLTNEEGLQRFNVYSPDNIPVDGTLNVTVNCSCGNREVSKDYGLFITYPLTSKDTLESIAKDNKLDAELLQRYNPGVNFSQGTGLVFIPGKGSGAIAGISVGVLAGILLSSFGVYVKYYLKKKAWKKNLTLDDSKMMNSAQIGTEITGLLVEKSQEFSYKELSIATNKFSMSNKIGEGGFGEVFYAELRGQKAAIKKMRMKASKEFCAELKVLTRVHHLNLVGLIGYCVEGFLFLVYEYIDNGNLSQNLRDSERESLTWSTRMQIALDSARALEYIHEHTVHGYIHRDIKSENILLDKRFRAKVTDFGLSKLADVENSTSSNKIVQGTFGYMPPEYARGGVAPSPKIDVYAFGVVLYELISAKQAVIRDGPEVKGLVALFDEVFDHETNPTEALKNLVDPRLGDNYSVDSVCNIAKLAKACTMKDPQLRPSMRSVVVALTTLTSTTEDWNVSSFFENPAFVNLMSGK* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2237 584 SUPERFAMILY Protein kinase-like (PK-like) 268 556 IPR011009 -
Tpr4g2237 584 Pfam LysM domain 169 197 IPR018392 -
Tpr4g2237 584 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 5 584 IPR044812 GO:0019199|GO:0045087
Tpr4g2237 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Tpr4g2237 584 ProSiteProfiles Protein kinase domain profile. 286 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2237 584 Pfam Protein tyrosine and serine/threonine kinase 287 555 IPR001245 GO:0004672|GO:0006468
Tpr4g2237 584 PANTHER LYSM RECEPTOR KINASE 1B 5 584 - -
Tpr4g2237 584 SMART serkin_6 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2237 584 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Tpr4g2237 584 Gene3D Transferase(Phosphotransferase) domain 1 357 574 - -
Tpr4g2237 584 Gene3D Phosphorylase Kinase; domain 1 259 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2237 Tpr-Chr4 23421220 23425186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2237 9 584 Receptor kinase-like Gene Family AT3G21630 51.299 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2237 PK_Tyr_Ser-Thr 5.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2237 - K13429 gmx:100803042 701.819